RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TNFAIP6P98066 277 aaPredicted RBP18.54■□□□□ 0.56
SH3D19-211ENST00000604030 EIF4EBP2Q13542 120 aaPredicted RBP18.54■□□□□ 0.56
SH3D19-211ENST00000604030 OR5AU1Q8NGC0 362 aa18.54■□□□□ 0.56
SH3D19-211ENST00000604030 RFESDQ8TAC1 157 aa18.54■□□□□ 0.56
SH3D19-211ENST00000604030 RAB33BQ9H082 229 aa18.54■□□□□ 0.56
SH3D19-211ENST00000604030 HAND1O96004 215 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 PERPQ96FX8 193 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 GPX7Q96SL4 187 aaPredicted RBP18.53■□□□□ 0.56
SH3D19-211ENST00000604030 SEMA7AO75326 666 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 SCGB1C2P0DMR2 95 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 RIGQ13278 110 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 OR2Y1Q8NGV0 311 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 MRGPRDQ8TDS7 321 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 STRCQ7RTU9 1775 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 ZNF343Q6P1L6 599 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 KCNK15Q9H427 330 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 CLEC1BQ9P126 229 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 M0R2Z0 102 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 CXorf1O96002 111 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 FAM3BP58499 235 aaPredicted RBP18.53■□□□□ 0.56
SH3D19-211ENST00000604030 NCMAPQ5T1S8 102 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 Q6ZN92 141 aa18.53■□□□□ 0.56
SH3D19-211ENST00000604030 EIF4E3Q8N5X7 224 aaKnown RBP18.52■□□□□ 0.56
SH3D19-211ENST00000604030 GEMIN2O14893 280 aaKnown RBP18.52■□□□□ 0.56
SH3D19-211ENST00000604030 NEURL1O76050 574 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 STAG3L2P0CL84 134 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 C1orf174Q8IYL3 243 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 PLA2G2FQ9BZM2 168 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 OR2H1Q9GZK4 316 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 GMPPAQ96IJ6 420 aaPredicted RBP18.52■□□□□ 0.56
SH3D19-211ENST00000604030 LRRC3BQ96PB8 259 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 NRIP2Q9BQI9 281 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 RSRP1Q9BUV0 290 aa18.52■□□□□ 0.56
SH3D19-211ENST00000604030 TRBV5-5A0A0J9YX44 114 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 SHISA7A6NL88 538 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 OR2J3O76001 311 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 COL9A1P20849 921 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 PMELP40967 661 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 GNG10P50151 68 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 CXorf67Q86X51 503 aaPredicted RBP18.52■□□□□ 0.55
SH3D19-211ENST00000604030 ADAMTS17Q8TE56 1095 aa18.52■□□□□ 0.55
SH3D19-211ENST00000604030 ZNF98A6NK75 572 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 ACAA2P42765 397 aaKnown RBP18.51■□□□□ 0.55
SH3D19-211ENST00000604030 UBE2V2Q15819 145 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 OR10AC1Q8NH08 325 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 MIOXQ9UGB7 285 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 VSIG4Q9Y279 399 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 CACNA1CQ13936 2221 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 TRAV38-1A0A0B4J264 116 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 HLA-DQB1P01920 261 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 HFEQ30201 348 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 A0A0U1RQV5 110 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 A0A1W2PPC1 479 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 MT-CO3P00414 261 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 SLC26A1Q9H2B4 701 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 DEFB108AA8MXU0 73 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 LIMS1P48059 325 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 ISOC2Q96AB3 205 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 ARRDC1-AS1Q9H2J1 176 aa18.51■□□□□ 0.55
SH3D19-211ENST00000604030 TCAPO15273 167 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 FBXO17Q96EF6 278 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 MAP1LC3CQ9BXW4 147 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 DSPPQ9NZW4 1301 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 TRGV8A0A0C4DH27 118 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 NMBP08949 121 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 NSUN5P2Q63ZY6 315 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 GFRALQ6UXV0 394 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 UBALD1Q8TB05 177 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 GPA33Q99795 319 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 CCL28Q9NRJ3 127 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 C1QL3Q5VWW1 255 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.5■□□□□ 0.55
SH3D19-211ENST00000604030 DOLPP1Q86YN1 238 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 SCN9AQ15858 1988 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 PAFAH1B2P68402 229 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 ADAD2Q8NCV1 583 aaKnown RBP18.5■□□□□ 0.55
SH3D19-211ENST00000604030 PTPMT1Q8WUK0 201 aaPredicted RBP18.5■□□□□ 0.55
SH3D19-211ENST00000604030 TMEM38BQ9NVV0 291 aa18.5■□□□□ 0.55
SH3D19-211ENST00000604030 NKX2-6A6NCS4 301 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 CIDEAO60543 219 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 ZNF83P51522 516 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 SNX22Q96L94 193 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
SH3D19-211ENST00000604030 ISLRO14498 428 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 HIST3H3Q16695 136 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 TMEM92Q6UXU6 159 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 ATP6V0CP27449 155 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 MRPL30Q8TCC3 161 aaKnown RBP18.49■□□□□ 0.55
SH3D19-211ENST00000604030 LYZL2Q7Z4W2 148 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 OR1L6Q8NGR2 347 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 TRMT61AQ96FX7 289 aaKnown RBP18.49■□□□□ 0.55
SH3D19-211ENST00000604030 WDR54Q9H977 334 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 HSPB8Q9UJY1 196 aa18.49■□□□□ 0.55
SH3D19-211ENST00000604030 SCN1AP35498 2009 aa18.48■□□□□ 0.55
SH3D19-211ENST00000604030 K7ESF4 209 aa18.48■□□□□ 0.55
SH3D19-211ENST00000604030 DXOO77932 396 aaKnown RBP18.48■□□□□ 0.55
SH3D19-211ENST00000604030 TMEM50BP56557 158 aa18.48■□□□□ 0.55
SH3D19-211ENST00000604030 TSPO2Q5TGU0 170 aa18.48■□□□□ 0.55
SH3D19-211ENST00000604030 SSX8Q7RTT4 187 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms