RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 RASL10BQ96S79 203 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 GPER1Q99527 375 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 TWSG1Q9GZX9 223 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 EMC9Q9Y3B6 208 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 IGKV1D-42A0A075B6H8 117 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 MEGF11A6BM72 1044 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 SLC16A7O60669 478 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 SRP19P09132 144 aaKnown RBP13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 LINC00346Q8IVM7 164 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 OIT3Q8WWZ8 545 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 WFDC1Q9HC57 220 aa13.4□□□□□ -0.26
PPFIA3-206ENST00000602655 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.27
PPFIA3-206ENST00000602655 TRAV34A0A0B4J273 112 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 OR5AC1P0C628 307 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 APOBEC1P41238 236 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 COL5A1-AS1Q5SY13 56 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 KMT5CQ86Y97 462 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 SUMF1Q8NBK3 374 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 NAGKQ9UJ70 344 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 LMX1BO60663 402 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 IGHV3-9P01782 118 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 IGHEP01854 428 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 CCL3P10147 92 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 RPS4Y1P22090 263 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 SPINK14Q6IE38 97 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 FGGYQ96C11 551 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 SYT3Q9BQG1 590 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 NICN1Q9BSH3 213 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 SCRT1Q9BWW7 348 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
PPFIA3-206ENST00000602655 CSRP1P21291 193 aaKnown RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 SLC25A1P53007 311 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 CHRFAM7AQ494W8 412 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 TMEM164Q5U3C3 297 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 RPS19BP1Q86WX3 136 aaKnown RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 ASB5Q8WWX0 329 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 TMEM9BQ9NQ34 198 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 C19orf25Q9UFG5 118 aaPredicted RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 HHLA2Q9UM44 414 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 LCATP04180 440 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 GUSBP08236 651 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 BRS3P32247 399 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 SUPT4H1P63272 117 aaKnown RBP13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 MPV17LQ2QL34 196 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 CDCP2Q5VXM1 449 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 SULF2Q8IWU5 870 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 HES7Q9BYE0 225 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 A0A087WWC5 75 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 E5RGE8 158 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF205O95201 554 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 LYPD3O95274 346 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 UMODP07911 640 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 GABRR1P24046 479 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 P2RY1P47900 373 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 THRSPQ92748 146 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 STRADBQ9C0K7 418 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 MMP25Q9NPA2 562 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 B3GALT5Q9Y2C3 310 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 NSG2Q9Y328 171 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 NBEAQ8NFP9 2946 aa13.38□□□□□ -0.27
PPFIA3-206ENST00000602655 P2RY10O00398 339 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 DEDDO75618 318 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 PRSS12P56730 875 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 RBX1P62877 108 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 C1orf194Q5T5A4 169 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 C9orf135Q5VTT2 229 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 LYPD6BQ8NI32 183 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 RPS4Y2Q8TD47 263 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 GAL3ST2Q9H3Q3 398 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 POLR3KQ9Y2Y1 108 aaPredicted RBP13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 PAX1P15863 534 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 TLE3Q04726 772 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 GNMTQ14749 295 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF74Q16587 644 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 GPR157Q5UAW9 335 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 OR5L2Q8NGL0 311 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 CT55Q8WUE5 264 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 AQP3Q92482 292 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 EML6Q6ZMW3 1958 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 SPINK2P20155 84 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 ACKR1Q16570 336 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 ZNF684Q5T5D7 378 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 TMPRSS7Q7RTY8 843 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 SMIM15Q7Z3B0 74 aa13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
PPFIA3-206ENST00000602655 AKAP6Q13023 2319 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 TSPAN2O60636 221 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 NXPH2O95156 264 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 ABHD16AO95870 558 aa13.36□□□□□ -0.27
PPFIA3-206ENST00000602655 OR10J1P30954 320 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms