RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CHD6Q8TD26 2715 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 ZGRF1Q86YA3 2104 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 HEATR1Q9H583 2144 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 A0A0B4J2A0 478 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 C5orf51A6NDU8 294 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 M0R1B8 84 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 AADACP22760 399 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 HOXA4Q00056 320 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF718Q3SXZ3 478 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 MBNL2Q5VZF2 373 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 TMUB2Q71RG4 321 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 C11orf53Q8IXP5 236 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 MRPL30Q8TCC3 161 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 IFT22Q9H7X7 185 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 SPACA1Q9HBV2 294 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 RDH8Q9NYR8 311 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 SHPKQ9UHJ6 478 aa14.44□□□□□ -0.1
SHKBP1-216ENST00000598201 A0A0G2JNJ9 132 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 TMEM210A6NLX4 147 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 A8MXE2 369 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 PRRG2O14669 202 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 DEGS1O15121 323 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF44P15621 663 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 TUBG1P23258 451 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 HERPUD1Q15011 391 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 SRSF7Q16629 238 aaKnown RBP eCLIP14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 GFRALQ6UXV0 394 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF826PQ6ZT77 177 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 COQ8AQ8NI60 647 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 MOB3AQ96BX8 217 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 DHRS9Q9BPW9 319 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 RHOFQ9HBH0 211 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 TUBG2Q9NRH3 451 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 Q9UFV3 132 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 FAM208BQ5VWN6 2430 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 CADP27708 2225 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 CRYM-AS1A6NIL9 109 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 C1QL1O75973 258 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 IFNA2P01563 188 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 GCH1P30793 250 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 RBMXP38159 391 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 PIGPP57054 158 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 C11orf87Q6NUJ2 197 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 GSG1LQ6UXU4 331 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 RAB18Q9NP72 206 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 SH3BGRL2Q9UJC5 107 aa14.43□□□□□ -0.1
SHKBP1-216ENST00000598201 IGKV1-6A0A0C4DH72 117 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 NXPH2O95156 264 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 OR2H2O95918 312 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 RPA2P15927 270 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 S100A11P31949 105 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 GLP1RP43220 463 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 FGL1Q08830 312 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 EXOSC2Q13868 293 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 PRAMEF6Q5VXH4 476 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF546Q86UE3 836 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 LRP11Q86VZ4 500 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 Q8IYB0 196 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 GTF3AQ92664 365 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 MFFQ9GZY8 342 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 ARL6Q9H0F7 186 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 CXXC4Q9H2H0 198 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 COMMD9Q9P000 198 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 TEX13DA0A0J9YY54 714 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 SIRPB1O00241 398 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 BET1O15155 118 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 PPYP01298 95 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 AP2S1P53680 142 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 PHLDA2Q53GA4 152 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 SGPP2Q8IWX5 399 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 OR5T2Q8NGG2 359 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 SUN5Q8TC36 379 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 MUCL1Q96DR8 90 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 OR10C1Q96KK4 312 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 FBXO9Q9UK97 447 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 ATP23Q9Y6H3 246 aa14.42□□□□□ -0.1
SHKBP1-216ENST00000598201 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 TRDCB7Z8K6 153 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 SLC33A1O00400 549 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 WNT9BO14905 357 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 GLAP06280 429 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 SLC25A4P12235 298 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 RCC1P18754 421 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 ATXN7L3Q14CW9 347 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 RGS7BPQ6MZT1 257 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 TMEM65Q6PI78 240 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 OR11L1Q8NGX0 322 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 ANGPTL6Q8NI99 470 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 HES4Q9HCC6 221 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF835Q9Y2P0 537 aa14.41□□□□□ -0.1
SHKBP1-216ENST00000598201 CFAP46Q8IYW2 2715 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TRBV6-6A0A0A6YYG2 114 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 SNAPC5O75971 98 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 HOXB5P09067 269 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 CCKARP32238 428 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 UCP3P55916 312 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TLE1Q04724 770 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 RBM39Q14498 530 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF146Q15072 292 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 POC1AQ8NBT0 407 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms