RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 METTL8Q9H825 291 aaKnown RBP16.7■□□□□ 0.26
PNKP-211ENST00000598020 NUP50Q9UKX7 468 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 LINC00312Q9Y6C7 94 aa16.7■□□□□ 0.26
PNKP-211ENST00000598020 JMJD1CQ15652 2540 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 KIAA2026Q5HYC2 2103 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 RBP4P02753 201 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 PRTN3P24158 256 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 BPIFB3P59826 476 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 AESQ08117 197 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 ZNF273Q14593 569 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 C2orf76Q3KRA6 126 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 HES5Q5TA89 166 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 SIGIRRQ6IA17 410 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 TCF23Q7RTU1 214 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 OR51D1Q8NGF3 324 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 FUNDC2Q9BWH2 189 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 BARHL1Q9BZE3 327 aa16.69■□□□□ 0.26
PNKP-211ENST00000598020 UBE2J1Q9Y385 318 aaPredicted RBP16.69■□□□□ 0.26
PNKP-211ENST00000598020 NF1P21359 2839 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 ODAMA1E959 279 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 C17orf98A8MV24 154 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 ZNF728P0DKX0 622 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 FUT3P21217 361 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 GLIPR1P48060 266 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 CLDN12P56749 244 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 RIPPLY3P57055 190 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 ATXN7L3Q14CW9 347 aaPredicted RBP16.68■□□□□ 0.26
PNKP-211ENST00000598020 TUSC1Q2TAM9 212 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 KRBOX4Q5JUW0 171 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 ATAD3CQ5T2N8 411 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 RSBN1Q5VWQ0 802 aaPredicted RBP16.68■□□□□ 0.26
PNKP-211ENST00000598020 VMO1Q7Z5L0 202 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 BPIFB2Q8N4F0 458 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 FAM89BQ8N5H3 189 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 TPRX1Q8N7U7 411 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 TNFRSF14Q92956 283 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 KCNK15Q9H427 330 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 MXRA5Q9NR99 2828 aa16.68■□□□□ 0.26
PNKP-211ENST00000598020 CENPVL3A0A0U1RRI6 287 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 hCG_1809904A0A1W2PP81 198 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 A0A1W2PPE2 198 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 A0A1W2PR64 198 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 A0A1W2PRV1 198 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 TMEM127O75204 238 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 IGHV4-38-2P0DP08 117 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 CCL3L1P16619 93 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 RBM39Q14498 530 aaKnown RBP16.67■□□□□ 0.26
PNKP-211ENST00000598020 C9orf139Q6ZV77 190 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 ZNF714Q96N38 554 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 URM1Q9BTM9 101 aaKnown RBP16.67■□□□□ 0.26
PNKP-211ENST00000598020 LPAR5Q9H1C0 372 aa16.67■□□□□ 0.26
PNKP-211ENST00000598020 TRGV10A0A0A0MS01 117 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 TRAV40A0A0B4J280 105 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 MCRIP1C9JLW8 97 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 HSPB6O14558 160 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 PDCD6O75340 191 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 EPHA1P21709 976 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 NCR3LG1Q68D85 454 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 SLC35E4Q6ICL7 350 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 RAB12Q6IQ22 244 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 SFXN4Q6P4A7 337 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 ANKRD13BQ86YJ7 626 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 PLPPR1Q8TBJ4 325 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 PTX4Q96A99 478 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 LIN7BQ9HAP6 207 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 TAS2R3Q9NYW6 316 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 OR6C3Q9NZP0 311 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 RAB22AQ9UL26 194 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 PEX16Q9Y5Y5 336 aa16.66■□□□□ 0.26
PNKP-211ENST00000598020 TMEM272A0A1B0GTI8 110 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 CA11O75493 328 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 CLEC2LP0C7M8 214 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 RAB6AP20340 208 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 CHATP28329 748 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 GUCA2AQ02747 115 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 GAPTQ8N292 157 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 SIRT7Q9NRC8 400 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 KIF25Q9UIL4 384 aa16.65■□□□□ 0.26
PNKP-211ENST00000598020 A0A0A6YYD4 124 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 IGHV1-69DA0A0B4J2H0 117 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 SMIM30A4D0T7 59 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 FOXI3A8MTJ6 420 aaPredicted RBP16.64■□□□□ 0.25
PNKP-211ENST00000598020 RNASEK-C17orf49H0YIS7 233 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 IGHV1-69P01742 117 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 CGB3P0DN86 165 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 CGB7P0DN87 165 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 SLC2A2P11168 524 aaPredicted RBP16.64■□□□□ 0.25
PNKP-211ENST00000598020 FPR2P25090 351 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 RPL5P46777 297 aaKnown RBP16.64■□□□□ 0.25
PNKP-211ENST00000598020 MXD1Q05195 221 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 FAM189A2Q15884 450 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 ZNF497Q6ZNH5 498 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 SLC16A12Q6ZSM3 486 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 GPR141Q7Z602 305 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 ZNF565Q8N9K5 539 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 LHX4Q969G2 390 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 NEDD4LQ96PU5 975 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 NICN1Q9BSH3 213 aa16.64■□□□□ 0.25
PNKP-211ENST00000598020 GAL3ST2Q9H3Q3 398 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms