RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TMEM203Q969S6 136 aa13.61□□□□□ -0.23
SSBP4-204ENST00000597724 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
SSBP4-204ENST00000597724 DPAGT1Q9H3H5 408 aa13.61□□□□□ -0.23
SSBP4-204ENST00000597724 TCF7L1Q9HCS4 588 aa13.61□□□□□ -0.23
SSBP4-204ENST00000597724 TAS2R3Q9NYW6 316 aa13.61□□□□□ -0.23
SSBP4-204ENST00000597724 ZNF581Q9P0T4 197 aa13.61□□□□□ -0.23
SSBP4-204ENST00000597724 HSPB6O14558 160 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 GEMIN2O14893 280 aaKnown RBP13.6□□□□□ -0.23
SSBP4-204ENST00000597724 MMP23AO75900 390 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 CLPXO76031 633 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 RPS25P62851 125 aaKnown RBP13.6□□□□□ -0.23
SSBP4-204ENST00000597724 PAX5Q02548 391 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 FOXL1Q12952 345 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 TRAM1Q15629 374 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 HSD17B12Q53GQ0 312 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 LINC00596Q86U02 117 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 LRRTM1Q86UE6 522 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 SUMF2Q8NBJ7 301 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 MRPS24Q96EL2 167 aaKnown RBP13.6□□□□□ -0.23
SSBP4-204ENST00000597724 UQCC2Q9BRT2 126 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 GAL3ST2Q9H3Q3 398 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 NCOR1P1Q9H4R4 102 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 ING3Q9NXR8 418 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 SESN1Q9Y6P5 492 aa13.6□□□□□ -0.23
SSBP4-204ENST00000597724 FAM90A8PA6NJQ4 464 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 MRPS14O60783 128 aaKnown RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 PSMA1P25786 263 aaKnown RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 KCNJ3P48549 501 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 LGALS4P56470 323 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 EMX1Q04741 257 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 TAF9Q16594 264 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 ZNF626Q68DY1 528 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 AWAT2Q6E213 333 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 HEPN1Q6WQI6 88 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 ZNF367Q7RTV3 350 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 PLPPR1Q8TBJ4 325 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 DYRK2Q92630 601 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 DPCDQ9BVM2 203 aaPredicted RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 YTHDF1Q9BYJ9 559 aaKnown RBP13.59□□□□□ -0.23
SSBP4-204ENST00000597724 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 ACOT13Q9NPJ3 140 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 ANK2Q01484 3957 aa13.59□□□□□ -0.23
SSBP4-204ENST00000597724 CGB3P0DN86 165 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 CGB7P0DN87 165 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 CD37P11049 281 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 AWAT1Q58HT5 328 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 C1orf100Q5SVJ3 147 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 RSBN1Q5VWQ0 802 aaPredicted RBP13.58□□□□□ -0.24
SSBP4-204ENST00000597724 GLT8D1Q68CQ7 371 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 TMEM104Q8NE00 496 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.243e-6■■■□□ 16.3
SSBP4-204ENST00000597724 FOXRED1Q96CU9 486 aaPredicted RBP13.58□□□□□ -0.24
SSBP4-204ENST00000597724 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 GHRLQ9UBU3 117 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 KIF25Q9UIL4 384 aa13.58□□□□□ -0.24
SSBP4-204ENST00000597724 TBL2Q9Y4P3 447 aaKnown RBP13.58□□□□□ -0.24
SSBP4-204ENST00000597724 MEIKINA0A087WXM9 373 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 IGHV2-26A0A0B4J1V2 119 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 ZNF729A6NN14 1252 aaPredicted RBP13.57□□□□□ -0.24
SSBP4-204ENST00000597724 GPR137BO60478 399 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 ARG1P05089 322 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 CDK2P24941 298 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 PAX6P26367 422 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 GABRA5P31644 462 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 RPL15P61313 204 aaKnown RBP13.57□□□□□ -0.24
SSBP4-204ENST00000597724 C17orf58Q2M2W7 97 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 PRAMEF5Q5TYX0 476 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 OR52W1Q6IF63 320 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 ZNF565Q8N9K5 539 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 OR5R1Q8NH85 324 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 BANF2Q9H503 90 aa13.57□□□□□ -0.24
SSBP4-204ENST00000597724 KBTBD11-OT1A0A1B0GTJ5 212 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 BTBD17A6NE02 478 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
SSBP4-204ENST00000597724 ARL6IP5O75915 188 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 CRYBA1P05813 215 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 MGMTP16455 207 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 OMGP23515 440 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 GDNFP39905 211 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 FABP5Q01469 135 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 DYNC1I2Q13409 638 aaKnown RBP13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SSX1Q16384 188 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 AANATQ16613 207 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 LDLRAD2Q5SZI1 272 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SLC35E4Q6ICL7 350 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 GDPGP1Q6ZNW5 385 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SPARTQ8N0X7 666 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 DYNAPQ8N1N2 210 aa13.56□□□□□ -0.24
SSBP4-204ENST00000597724 SVOPQ8N4V2 548 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms