RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 BPIFB2Q8N4F0 458 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 RAB2BQ8WUD1 216 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 NEDD4LQ96PU5 975 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 BARHL1Q9BZE3 327 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 LPAR5Q9H1C0 372 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 CDC42EP3Q9UKI2 254 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 PEX16Q9Y5Y5 336 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 SONP18583 2426 aaKnown RBP11.84□□□□□ -0.51
VRK3-213ENST00000597215 MCRIP1C9JLW8 97 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 INAFM1C9JVW0 142 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 M0R1W7 72 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 GLAP06280 429 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 SNRPBP14678 240 aaKnown RBP11.83□□□□□ -0.52
VRK3-213ENST00000597215 TMBIM6P55061 237 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 ARF6P62330 175 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 PAX5Q02548 391 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 AESQ08117 197 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 BLMHQ13867 455 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 SIGIRRQ6IA17 410 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 METAP1DQ6UB28 335 aaPredicted RBP11.83□□□□□ -0.52
VRK3-213ENST00000597215 FAM89BQ8N5H3 189 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 PTX4Q96A99 478 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 SLC25A46Q96AG3 418 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 COQ2Q96H96 371 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 NICN1Q9BSH3 213 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 OPN4Q9UHM6 478 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
VRK3-213ENST00000597215 MTORP42345 2549 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 A0A0A6YYD4 124 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 ODAMA1E959 279 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 TOX4O94842 621 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 AVPP01185 164 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 CHATP28329 748 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 BLVRBP30043 206 aaPredicted RBP11.82□□□□□ -0.52
VRK3-213ENST00000597215 GLIPR1P48060 266 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 ZNF273Q14593 569 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 NKAPLQ5M9Q1 402 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 RSBN1Q5VWQ0 802 aaPredicted RBP11.82□□□□□ -0.52
VRK3-213ENST00000597215 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
VRK3-213ENST00000597215 TRAPPC6BQ86SZ2 158 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 LGALS14Q8TCE9 139 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 UPRTQ96BW1 309 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 PCGF1Q9BSM1 259 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 SIRPDQ9H106 197 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 DCSTAMPQ9H295 470 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 NCOR1P1Q9H4R4 102 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 OR6C3Q9NZP0 311 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 ABRACLQ9P1F3 81 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
VRK3-213ENST00000597215 ETV7Q9Y603 341 aa11.82□□□□□ -0.52
VRK3-213ENST00000597215 ANK3Q12955 4377 aaKnown RBP11.81□□□□□ -0.52
VRK3-213ENST00000597215 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
VRK3-213ENST00000597215 TRGV10A0A0A0MS01 117 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 hCG_1809904A0A1W2PP81 198 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 A0A1W2PPE2 198 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 A0A1W2PR64 198 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 A0A1W2PRV1 198 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 TMEM30CPA0ZSE6 113 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 METTL21EPA6NDL7 271 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 SOCS1O15524 211 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 PAHP00439 452 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 MMP9P14780 707 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 SRP14P37108 136 aaKnown RBP11.81□□□□□ -0.52
VRK3-213ENST00000597215 VEGFCP49767 419 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 EFNB2P52799 333 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 PLA2G7Q13093 441 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 SLC35E4Q6ICL7 350 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 BRICD5Q6PL45 260 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 IL17RELQ6ZVW7 336 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 TCF23Q7RTU1 214 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 NANPQ8TBE9 248 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
VRK3-213ENST00000597215 ZNF714Q96N38 554 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 BEX2Q9BXY8 128 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 METTL8Q9H825 291 aaKnown RBP11.81□□□□□ -0.52
VRK3-213ENST00000597215 PLEKHJ1Q9NW61 149 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 ETAA1Q9NY74 926 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 KIF25Q9UIL4 384 aa11.81□□□□□ -0.52
VRK3-213ENST00000597215 MEIKINA0A087WXM9 373 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 MEX3AA1L020 520 aaKnown RBP11.8□□□□□ -0.52
VRK3-213ENST00000597215 CA11O75493 328 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 RBP4P02753 201 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 CCL3L1P16619 93 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 GLP1RP43220 463 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 RORCP51449 518 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 CHRFAM7AQ494W8 412 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 ZNF497Q6ZNH5 498 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 C6orf201Q7Z4U5 140 aa11.8□□□□□ -0.52
VRK3-213ENST00000597215 VMO1Q7Z5L0 202 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms