RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 OPALINQ96PE5 141 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 SLC25A33Q9BSK2 321 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 ZCCHC4Q9H5U6 513 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
LIG1-214ENST00000597146 ANKRD65E5RJM6 399 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 SH2D1BO14796 132 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 IGHA1P01876 353 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 TMEM225BP0DP42 221 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 CALCBP10092 127 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 PRKACAP17612 351 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 PEX2P28328 305 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 SCN1BQ07699 218 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
LIG1-214ENST00000597146 ZNF691Q5VV52 312 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 C16orf82Q7Z2V1 217 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 SATL1Q86VE3 508 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 FAM58AQ8N1B3 248 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 NDNFQ8TB73 568 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 CNIH3Q8TBE1 160 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 AKR1E2Q96JD6 320 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 GPER1Q99527 375 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 LIN7BQ9HAP6 207 aa12.23□□□□□ -0.45
LIG1-214ENST00000597146 FGF20Q9NP95 211 aaPredicted RBP12.23□□□□□ -0.45
LIG1-214ENST00000597146 MRPS18AQ9NVS2 196 aaKnown RBP12.23□□□□□ -0.45
LIG1-214ENST00000597146 ZNF256Q9Y2P7 627 aaPredicted RBP12.23□□□□□ -0.45
LIG1-214ENST00000597146 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 CD2P06729 351 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 DUSP1P28562 367 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 SOX2P48431 317 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 PDZK1IP1Q13113 114 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 C9orf66Q5T8R8 295 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 C8orf59Q8N0T1 100 aaPredicted RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 OR51A4Q8NGJ6 313 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 OR10AC1Q8NH08 325 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 CAPSLQ8WWF8 208 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 CPNE2Q96FN4 548 aaPredicted RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 TMEM80Q96HE8 168 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 SNX22Q96L94 193 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 PDCD1LG2Q9BQ51 273 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 HES4Q9HCC6 221 aa12.22□□□□□ -0.45
LIG1-214ENST00000597146 EXOSC1Q9Y3B2 195 aaKnown RBP12.22□□□□□ -0.45
LIG1-214ENST00000597146 E9PI62 339 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 F8VVB4 439 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 F8VWA3 439 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 K7N7A8 449 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 WBP4O75554 376 aaKnown RBP12.21□□□□□ -0.45
LIG1-214ENST00000597146 LY86O95711 162 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 HAND1O96004 215 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 RAB3AP20336 220 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 BCL3P20749 454 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 IL18R1Q13478 541 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 GRK1Q15835 563 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 DEFB136Q30KP8 78 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 OR5D18Q8NGL1 313 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 APH1BQ8WW43 257 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.45
LIG1-214ENST00000597146 SPACA5Q96QH8 159 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 SCOCQ9UIL1 159 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 GSTK1Q9Y2Q3 226 aa12.21□□□□□ -0.45
LIG1-214ENST00000597146 IGKV1-9A0A0C4DH69 117 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 hADV38S2A0JD32 116 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 FUOMA2VDF0 154 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 CAPGP40121 348 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 OR3A4PP47883 348 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 NPBWR2P48146 333 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 ETV1P50549 477 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
LIG1-214ENST00000597146 GP2P55259 537 aaKnown RBP12.2□□□□□ -0.46
LIG1-214ENST00000597146 CCDC58Q4VC31 144 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 MINOS1Q5TGZ0 78 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 STX19Q8N4C7 294 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 GPR148Q8TDV2 347 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 NOL4LQ96MY1 436 aaPredicted RBP12.2□□□□□ -0.46
LIG1-214ENST00000597146 S100A13Q99584 98 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 DCLRE1BQ9H816 532 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 EXOSC4Q9NPD3 245 aaKnown RBP12.2□□□□□ -0.46
LIG1-214ENST00000597146 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
LIG1-214ENST00000597146 MINOS1-NBL1R4GNA1 71 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 HSPE1-MOB4S4R3N1 261 aa12.2□□□□□ -0.46
LIG1-214ENST00000597146 EFCAB10A6NFE3 127 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 H3BUI4 141 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 CCL24O00175 119 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 DEGS1O15121 323 aa12.19□□□□□ -0.46
LIG1-214ENST00000597146 SULT1B1O43704 296 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms