RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 DPCDQ9BVM2 203 aaPredicted RBP21.11■□□□□ 0.97
TRIM28-204ENST00000594806 SELENOIQ9C0D9 397 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 TAS2R3Q9NYW6 316 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 OR6C3Q9NZP0 311 aa21.11■□□□□ 0.97
TRIM28-204ENST00000594806 ODAMA1E959 279 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 CCL3L1P16619 93 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 HILS1P60008 231 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 BRD3OSQ6XYD6 125 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 TPRX1Q8N7U7 411 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 TMEM104Q8NE00 496 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 COQ2Q96H96 371 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 Q96M66 194 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 GFI1Q99684 422 aa21.1■□□□□ 0.97
TRIM28-204ENST00000594806 TXNL4BQ9NX01 149 aaKnown RBP21.1■□□□□ 0.97
TRIM28-204ENST00000594806 TRIM64CA6NLI5 447 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 RNASEK-C17orf49H0YIS7 233 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 GLAP06280 429 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 VSIG8P0DPA2 414 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 GLIPR1P48060 266 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 RBM39Q14498 530 aaKnown RBP21.09■□□□□ 0.97
TRIM28-204ENST00000594806 ATXN7L3Q14CW9 347 aaPredicted RBP21.09■□□□□ 0.97
TRIM28-204ENST00000594806 RAB11BQ15907 218 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 ATAD3CQ5T2N8 411 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 C22orf42Q6IC83 251 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 TCF23Q7RTU1 214 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 OR2W3Q7Z3T1 314 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 TRAPPC6BQ86SZ2 158 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 BCL6BQ8N143 479 aaPredicted RBP21.09■□□□□ 0.97
TRIM28-204ENST00000594806 SLC25A28Q96A46 364 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 GAL3ST2Q9H3Q3 398 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 PRDM13Q9H4Q3 707 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 BANF2Q9H503 90 aa21.09■□□□□ 0.97
TRIM28-204ENST00000594806 RCC2Q9P258 522 aaKnown RBP21.09■□□□□ 0.97
TRIM28-204ENST00000594806 ARSBP15848 533 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 CD36P16671 472 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 JUNBP17275 347 aaPredicted RBP21.08■□□□□ 0.97
TRIM28-204ENST00000594806 CFPP27918 469 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 SLC35E4Q6ICL7 350 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 TPRA1Q86W33 373 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 ZNF565Q8N9K5 539 aa21.08■□□□□ 0.97
TRIM28-204ENST00000594806 TMEM14DPA8MWL7 114 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 HSPB6O14558 160 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 MPIG6BO95866 241 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 RAB3BP20337 219 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 TIMM50Q3ZCQ8 353 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 RSBN1Q5VWQ0 802 aaPredicted RBP21.07■□□□□ 0.96
TRIM28-204ENST00000594806 GDPGP1Q6ZNW5 385 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 SIGLECL1Q8N7X8 197 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 ZFAND2BQ8WV99 257 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 TMEM59Q9BXS4 323 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 FBLN5Q9UBX5 448 aa21.07■□□□□ 0.96
TRIM28-204ENST00000594806 ZNF729A6NN14 1252 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-204ENST00000594806 MCRIP1C9JLW8 97 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 IGHV1-8P0DP01 117 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 FUT3P21217 361 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 RPS27AP62979 156 aaKnown RBP21.06■□□□□ 0.96
TRIM28-204ENST00000594806 QRFPP83859 136 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 MIDNQ504T8 468 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 RUSC1-AS1Q66K80 236 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 OR13D1Q8NGV5 346 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 FAM46BQ96A09 425 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 KCTD7Q96MP8 289 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 TM2D1Q9BX74 207 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 ZMAT3Q9HA38 289 aaKnown RBP21.06■□□□□ 0.96
TRIM28-204ENST00000594806 STEAP1Q9UHE8 339 aa21.06■□□□□ 0.96
TRIM28-204ENST00000594806 MEIKINA0A087WXM9 373 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 NPFFO15130 113 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 CA11O75493 328 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 CLPXO76031 633 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 OR52W1Q6IF63 320 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 RAB12Q6IQ22 244 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 HCP5Q6MZN7 132 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 PDZD9Q8IXQ8 264 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 NEK7Q8TDX7 302 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 TMEM158Q8WZ71 300 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 ZNF48Q96MX3 618 aaPredicted RBP21.05■□□□□ 0.96
TRIM28-204ENST00000594806 URM1Q9BTM9 101 aaKnown RBP21.05■□□□□ 0.96
TRIM28-204ENST00000594806 OR51E2Q9H255 320 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 KIF25Q9UIL4 384 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 SESN1Q9Y6P5 492 aa21.05■□□□□ 0.96
TRIM28-204ENST00000594806 SHISA3A0PJX4 238 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 IFITM5A6NNB3 132 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 TRIM77I1YAP6 450 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 PDCD6O75340 191 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 KLRD1Q13241 179 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 UNC119Q13432 240 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 HEPN1Q6WQI6 88 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 PIP4P2Q8N4L2 257 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 PLPPR1Q8TBJ4 325 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 ZDHHC16Q969W1 377 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 FAM3DQ96BQ1 224 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 ZNF581Q9P0T4 197 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 FAM96BQ9Y3D0 163 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 PEX16Q9Y5Y5 336 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 ATRQ13535 2644 aa21.04■□□□□ 0.96
TRIM28-204ENST00000594806 TMEM30CPA0ZSE6 113 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 VENTXO95231 258 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 GADD45AP24522 165 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 P2RY14Q15391 338 aa21.03■□□□□ 0.96
TRIM28-204ENST00000594806 FAM189A2Q15884 450 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms