RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 LHFPL4Q7Z7J7 247 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 LINC00596Q86U02 117 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 ABHD12Q8N2K0 398 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 MS4A15Q8N5U1 240 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 ZNF485Q8NCK3 441 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 OR4C13Q8NGP0 309 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 LINC01006Q8NI28 216 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 CREB3L1Q96BA8 519 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 PGLYRP3Q96LB9 341 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 C16orf95Q9H693 158 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 FKBP14Q9NWM8 211 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 IL36GQ9NZH8 169 aa14.08□□□□□ -0.16
IRF3-208ENST00000594387 MEGF11A6BM72 1044 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 FAM90A8PA6NJQ4 464 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 ODF3BA8MYP8 253 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 TSPAN9O75954 239 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 OR7C1O76099 320 aaPredicted RBP14.07□□□□□ -0.16
IRF3-208ENST00000594387 MAS1P04201 325 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 IGFBP3P17936 291 aaPredicted RBP14.07□□□□□ -0.16
IRF3-208ENST00000594387 FSTP19883 344 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 CEACAM3P40198 252 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 HSPA13P48723 471 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 DOC2BQ14184 412 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 MED22Q15528 200 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 SLC22A6Q4U2R8 563 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 ATAD3CQ5T2N8 411 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 RNLSQ5VYX0 342 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 CDH26Q8IXH8 852 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 NEK7Q8TDX7 302 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 WFDC12Q8WWY7 111 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 ORAI1Q96D31 301 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 NPFFR1Q9GZQ6 430 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 ZNF696Q9H7X3 374 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 HILPDAQ9Y5L2 63 aa14.07□□□□□ -0.16
IRF3-208ENST00000594387 TIMM23O14925 209 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 GABRA5P31644 462 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 GLP1RP43220 463 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 RPS11P62280 158 aaKnown RBP eCLIP14.06□□□□□ -0.16
IRF3-208ENST00000594387 SPHARQ15513 63 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 MPV17LQ2QL34 196 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 PIGYQ3MUY2 71 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 PRAMEF5Q5TYX0 476 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 SLC35E4Q6ICL7 350 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 NKAIN3Q8N8D7 197 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 Q8NFD4 153 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 OR2T6Q8NHC8 308 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 NRG4Q8WWG1 115 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 COQ2Q96H96 371 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 DERL3Q96Q80 235 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 CDCA4Q9BXL8 241 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 NCOR1P1Q9H4R4 102 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 TCF7L1Q9HCS4 588 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 MRPS28Q9Y2Q9 187 aaKnown RBP14.06□□□□□ -0.16
IRF3-208ENST00000594387 DNHD1Q96M86 4753 aa14.06□□□□□ -0.16
IRF3-208ENST00000594387 TRBV5-7A0A0A0MS05 114 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 TRAV24A0A0B4J272 114 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 VGLL3A8MV65 326 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 LEUTXA8MZ59 168 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 F2RL2O00254 374 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 NFYBP25208 207 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 PAX6P26367 422 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 BRS3P32247 399 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 RBM11P57052 281 aaKnown RBP14.05□□□□□ -0.16
IRF3-208ENST00000594387 NHLRC3Q5JS37 347 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 AWAT2Q6E213 333 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 C11orf88Q6PI97 169 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 SUMF2Q8NBJ7 301 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 MUL1Q969V5 352 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 MRPS24Q96EL2 167 aaKnown RBP14.05□□□□□ -0.16
IRF3-208ENST00000594387 AJUBAQ96IF1 538 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 NKX3-1Q99801 234 aaPredicted RBP14.05□□□□□ -0.16
IRF3-208ENST00000594387 DPCDQ9BVM2 203 aaPredicted RBP14.05□□□□□ -0.16
IRF3-208ENST00000594387 CCDC90BQ9GZT6 254 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 RANBP3Q9H6Z4 567 aaPredicted RBP14.05□□□□□ -0.16
IRF3-208ENST00000594387 SPACA1Q9HBV2 294 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 DPM3Q9P2X0 92 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 FBLN5Q9UBX5 448 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 KIF25Q9UIL4 384 aa14.05□□□□□ -0.16
IRF3-208ENST00000594387 TRAV8-7A0A075B6U6 113 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 KBTBD11-OT1A0A1B0GTJ5 212 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 RGS10O43665 173 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 MYF6P23409 242 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 RBM39Q14498 530 aaKnown RBP14.04□□□□□ -0.16
IRF3-208ENST00000594387 ARSJQ5FYB0 599 aaPredicted RBP14.04□□□□□ -0.16
IRF3-208ENST00000594387 PRR31Q5SQ13 230 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 GLIPR1L1Q6UWM5 242 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 CAPSLQ8WWF8 208 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 PPIL3Q9H2H8 161 aaKnown RBP14.04□□□□□ -0.16
IRF3-208ENST00000594387 IFT22Q9H7X7 185 aa14.04□□□□□ -0.16
IRF3-208ENST00000594387 TET2Q6N021 2002 aaPredicted RBP14.03□□□□□ -0.16
IRF3-208ENST00000594387 M0QZ24 198 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 GEMIN2O14893 280 aaKnown RBP14.03□□□□□ -0.16
IRF3-208ENST00000594387 MMP23AO75900 390 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 GZMHP20718 246 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 KIR2DS4P43632 304 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 RAB13P51153 203 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 DYNLT3P51808 116 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 GPR50Q13585 617 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 ACSM3Q53FZ2 586 aa14.03□□□□□ -0.16
IRF3-208ENST00000594387 GLT8D1Q68CQ7 371 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms