RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 SRRM5B3KS81 715 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 SH2D1BO14796 132 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 IGKV1D-12P01611 117 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 FAM90A15PP0C7V4 464 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 FAM90A13PP0C7W8 464 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 FAM90A14PP0C7W9 464 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 FAM90A24PP0C7X0 464 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
FOXA3-202ENST00000594297 RPS27AP62979 156 aaKnown RBP12.73□□□□□ -0.37
FOXA3-202ENST00000594297 IL13RA2Q14627 380 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 ESCO2Q56NI9 601 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 NHLRC3Q5JS37 347 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 SPANXN2Q5MJ10 180 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 CRIP3Q6Q6R5 217 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 BAIAP2L2Q6UXY1 529 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 UPRTQ96BW1 309 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 ABCG5Q9H222 651 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 BANF2Q9H503 90 aa12.73□□□□□ -0.37
FOXA3-202ENST00000594297 RBFOX1Q9NWB1 397 aaKnown RBP12.73□□□□□ -0.37
FOXA3-202ENST00000594297 NBEAL2Q6ZNJ1 2754 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 CLPSL1A2RUU4 121 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 TMEM178BH3BS89 294 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 CTDSP2O14595 271 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 HPGDSO60760 199 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 NDUFA7O95182 113 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 LHBP01229 141 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 SFTPBP07988 381 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 NPBWR2P48146 333 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 RBM11P57052 281 aaKnown RBP12.72□□□□□ -0.37
FOXA3-202ENST00000594297 GMFBP60983 142 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 BTG1P62324 171 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 PAX2Q02962 417 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 OR10K2Q6IF99 312 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 BRD3OSQ6XYD6 125 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 OR5H6Q8NGV6 325 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 DIRAS2Q96HU8 199 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 ZNF488Q96MN9 340 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 NEDD4LQ96PU5 975 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 NLKQ9UBE8 527 aa12.72□□□□□ -0.37
FOXA3-202ENST00000594297 OOEPA6NGQ2 149 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 NKX6-3A6NJ46 265 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 LGALS8O00214 317 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 DEGS1O15121 323 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 NDUFA2O43678 99 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 TPPPO94811 219 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 CYB5R3P00387 301 aaPredicted RBP12.71□□□□□ -0.37
FOXA3-202ENST00000594297 CRYBA1P05813 215 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 PPIAL4GP0DN37 164 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 GABRR1P24046 479 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 PMELP40967 661 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 QRFPP83859 136 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 PITPNAQ00169 270 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 SCN1BQ07699 218 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 IKZF1Q13422 519 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 UNC119Q13432 240 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 MUC20Q8N307 709 aaPredicted RBP12.71□□□□□ -0.37
FOXA3-202ENST00000594297 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 OR6Q1Q8NGQ2 317 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 S100ZQ8WXG8 99 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 TM2D1Q9BX74 207 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 HES4Q9HCC6 221 aa12.71□□□□□ -0.37
FOXA3-202ENST00000594297 IGHV2-70DA0A0C4DH43 119 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 FABP12A6NFH5 140 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 OR2AT4A6NND4 320 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 CEACAM18A8MTB9 384 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 OR7C1O76099 320 aaPredicted RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 FSTL3O95633 263 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 ZNF44P15621 663 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 MNDAP41218 407 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 VEGFCP49767 419 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 MRPS15P82914 257 aaKnown RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 RBM39Q14498 530 aaKnown RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 ZNF146Q15072 292 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 TAF9Q16594 264 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 TMEM69Q5SWH9 247 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 BATF2Q8N1L9 274 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 DACT3Q96B18 629 aaPredicted RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 Q96M66 194 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 WDFY2Q96P53 400 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 NUDT16L1Q9BRJ7 211 aaKnown RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 SSBP3Q9BWW4 388 aaPredicted RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 LPAR5Q9H1C0 372 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 PRDM13Q9H4Q3 707 aa12.7□□□□□ -0.38
FOXA3-202ENST00000594297 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
FOXA3-202ENST00000594297 EXTL2Q9UBQ6 330 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms