RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 RPEQ96AT9 228 aa19■□□□□ 0.63
LSM4-202ENST00000593564 EXOGQ9Y2C4 368 aaKnown RBP19■□□□□ 0.63
LSM4-202ENST00000593564 ALPLP05186 524 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 HCKP08631 526 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 MTNR1BP49286 362 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 KRTAP10-11P60412 298 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 KISS1Q15726 138 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 TOMM40LQ969M1 308 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 MRPL48Q96GC5 212 aaKnown RBP18.99■□□□□ 0.63
LSM4-202ENST00000593564 NCOR1P1Q9H4R4 102 aa18.99■□□□□ 0.63
LSM4-202ENST00000593564 AMMECR1Q9Y4X0 333 aaPredicted RBP18.99■□□□□ 0.63
LSM4-202ENST00000593564 NBEAL2Q6ZNJ1 2754 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 SNTNA6NMZ2 147 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 E9PQ18 207 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 SULT1B1O43704 296 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 ATP5HO75947 161 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 RPSAP08865 295 aaKnown RBP18.98■□□□□ 0.63
LSM4-202ENST00000593564 GLP1RP43220 463 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 EGFEM1PQ0D2K5 195 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 VAX1Q5SQQ9 334 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 ELP2Q6IA86 826 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 SERPINA12Q8IW75 414 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 PARP16Q8N5Y8 322 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 LINC00482Q8N8I6 264 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 ZNF565Q8N9K5 539 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 OR5D14Q8NGL3 314 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 MYCBPQ99417 103 aaPredicted RBP18.98■□□□□ 0.63
LSM4-202ENST00000593564 LINC00574Q9H8X3 128 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 CALYQ9NYX4 217 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 ORC6Q9Y5N6 252 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 COL7A1Q02388 2944 aa18.98■□□□□ 0.63
LSM4-202ENST00000593564 PSMB11A5LHX3 300 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 H0YJX3 145 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 J3QR06 171 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 ZNF691Q5VV52 312 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 SYS1Q8N2H4 156 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 OR13A1Q8NGR1 328 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 OR56B4Q8NH76 319 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 LGALS12Q96DT0 336 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 ALG8Q9BVK2 526 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 GPR61Q9BZJ8 451 aa18.97■□□□□ 0.63
LSM4-202ENST00000593564 MEIKINA0A087WXM9 373 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 WI2-2373I1.2A0A1W2PRP0 233 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 HSPB6O14558 160 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 IL1AP01583 271 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 SNRNP70P08621 437 aaKnown RBP18.96■□□□□ 0.63
LSM4-202ENST00000593564 GALEQ14376 348 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 PAN3Q58A45 887 aaKnown RBP18.96■□□□□ 0.63
LSM4-202ENST00000593564 PXT1Q8NFP0 134 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 OR51D1Q8NGF3 324 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 FAM53CQ9NYF3 392 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 IDI2-AS1Q9NZ38 188 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 KIF25Q9UIL4 384 aa18.96■□□□□ 0.63
LSM4-202ENST00000593564 TRAV24A0A0B4J272 114 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 A0A1W2PPI3 338 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 TMEM212A6NML5 194 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 EI24O14681 340 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 CIB2O75838 187 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 ZFPL1O95159 310 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 C21orf33P30042 268 aaPredicted RBP18.95■□□□□ 0.62
LSM4-202ENST00000593564 RPL23AP62750 156 aaKnown RBP18.95■□□□□ 0.62
LSM4-202ENST00000593564 PAX5Q02548 391 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 MADCAM1Q13477 382 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 IL13RA2Q14627 380 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 ETV3LQ6ZN32 361 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 ZNF329Q86UD4 541 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 LHFPL3Q86UP9 236 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 MRPL41Q8IXM3 137 aaKnown RBP18.95■□□□□ 0.62
LSM4-202ENST00000593564 DRAM1Q8N682 238 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 CNIH3Q8TBE1 160 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 CPNE2Q96FN4 548 aaPredicted RBP18.95■□□□□ 0.62
LSM4-202ENST00000593564 NR1H4Q96RI1 486 aaPredicted RBP18.95■□□□□ 0.62
LSM4-202ENST00000593564 BARHL1Q9BZE3 327 aa18.95■□□□□ 0.62
LSM4-202ENST00000593564 NPIPB11E5RHQ5 1161 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 HOXD3P31249 432 aaPredicted RBP18.94■□□□□ 0.62
LSM4-202ENST00000593564 MRPL28Q13084 256 aaKnown RBP18.94■□□□□ 0.62
LSM4-202ENST00000593564 DEFB121Q5J5C9 76 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 C5orf56Q8N8D9 126 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 OR5AK2Q8NH90 309 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 CHPT1Q8WUD6 406 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 LEAP2Q969E1 77 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 ZNF649Q9BS31 505 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 ISG20L2Q9H9L3 353 aaKnown RBP18.94■□□□□ 0.62
LSM4-202ENST00000593564 AASSQ9UDR5 926 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 DHDHQ9UQ10 334 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 PSG11Q9UQ72 335 aa18.94■□□□□ 0.62
LSM4-202ENST00000593564 DYNC1I1O14576 645 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 FGF16O43320 207 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 IGHV3-7P01780 117 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 CCDC159P0C7I6 412 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 TMEM11P17152 192 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 GABRB1P18505 474 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 KCNJ3P48549 501 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 RAB7AP51149 207 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 ALDH3A2P51648 485 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 ZIK1Q3SY52 487 aaPredicted RBP18.93■□□□□ 0.62
LSM4-202ENST00000593564 RSBN1Q5VWQ0 802 aaPredicted RBP18.93■□□□□ 0.62
LSM4-202ENST00000593564 LPCAT4Q643R3 524 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 OR8H3Q8N146 312 aa18.93■□□□□ 0.62
LSM4-202ENST00000593564 OR10A7Q8NGE5 316 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms