RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 hADV38S2A0JD32 116 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 GEMIN2O14893 280 aaKnown RBP13.18□□□□□ -0.3
GCDH-210ENST00000590445 OR7C1O76099 320 aaPredicted RBP13.18□□□□□ -0.3
GCDH-210ENST00000590445 BPNT1O95861 308 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 RNASE1P07998 156 aaKnown RBP13.18□□□□□ -0.3
GCDH-210ENST00000590445 MGMTP16455 207 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 RAB3BP20337 219 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 P2RX3P56373 397 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 EDDM3AQ14507 147 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 RAB11BQ15907 218 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 DEFB112Q30KQ8 113 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 PAN3Q58A45 887 aaKnown RBP13.18□□□□□ -0.3
GCDH-210ENST00000590445 RUSC1-AS1Q66K80 236 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 TPRA1Q86W33 373 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 KCTD7Q96MP8 289 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 GFI1Q99684 422 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 OR51E2Q9H255 320 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 PPA2Q9H2U2 334 aa13.18□□□□□ -0.3
GCDH-210ENST00000590445 METTL8Q9H825 291 aaKnown RBP13.18□□□□□ -0.3
GCDH-210ENST00000590445 TRAV24A0A0B4J272 114 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 A0A1W2PP11 408 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 HAX1O00165 279 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 ARSBP15848 533 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 CFPP27918 469 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 PAX5Q02548 391 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 GUCA2AQ02747 115 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 SLC9A3R2Q15599 337 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 TAF9Q16594 264 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 METAP1DQ6UB28 335 aaPredicted RBP13.17□□□□□ -0.3
GCDH-210ENST00000590445 CHCHD6Q9BRQ6 235 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 BARHL1Q9BZE3 327 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 SELENOIQ9C0D9 397 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 UNKLQ9H9P5 680 aaKnown RBP13.17□□□□□ -0.3
GCDH-210ENST00000590445 LINC00312Q9Y6C7 94 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 DSCAML1Q8TD84 2053 aa13.17□□□□□ -0.3
GCDH-210ENST00000590445 MDFIC2A0A1B0GVS7 189 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 RBP4P02753 201 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 VSIG8P0DPA2 414 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 GADD45AP24522 165 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
GCDH-210ENST00000590445 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 NCR3LG1Q68D85 454 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 OR2W3Q7Z3T1 314 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 TMEM104Q8NE00 496 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 YIPF6Q96EC8 236 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 Q96M66 194 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 DPCDQ9BVM2 203 aaPredicted RBP13.16□□□□□ -0.3
GCDH-210ENST00000590445 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 MRPS26Q9BYN8 205 aaKnown RBP13.16□□□□□ -0.3
GCDH-210ENST00000590445 NCOR1P1Q9H4R4 102 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 BANF2Q9H503 90 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 STEAP1Q9UHE8 339 aa13.16□□□□□ -0.3
GCDH-210ENST00000590445 UBE2J1Q9Y385 318 aaPredicted RBP13.16□□□□□ -0.3
GCDH-210ENST00000590445 TRGV10A0A0A0MS01 117 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 LOC100506127A0A0U1RQW1 187 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 SHISA3A0PJX4 238 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 IFITM5A6NNB3 132 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 TMEM14DPA8MWL7 114 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
GCDH-210ENST00000590445 MPIG6BO95866 241 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 GLAP06280 429 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 ZNF728P0DKX0 622 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 SMIM18P0DKX4 95 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 HKR1P10072 659 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 AESQ08117 197 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 FOXL1Q12952 345 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 ZNF273Q14593 569 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
GCDH-210ENST00000590445 ATAD3CQ5T2N8 411 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 Q6YL49 198 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 Q8N7P7 452 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 CORO2AQ92828 525 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 FAM46BQ96A09 425 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 ZNF714Q96N38 554 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 URM1Q9BTM9 101 aaKnown RBP13.15□□□□□ -0.3
GCDH-210ENST00000590445 SIRT7Q9NRC8 400 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 OR6C3Q9NZP0 311 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 RCC2Q9P258 522 aaKnown RBP13.15□□□□□ -0.3
GCDH-210ENST00000590445 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
GCDH-210ENST00000590445 ODAMA1E959 279 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 C17orf98A8MV24 154 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 MCRIP1C9JLW8 97 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 AIPO00170 330 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 HSPB6O14558 160 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 AIREO43918 545 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 ERVFRD-1P60508 538 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 RPS27AP62979 156 aaKnown RBP13.14□□□□□ -0.31
GCDH-210ENST00000590445 QRFPP83859 136 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 P2RY14Q15391 338 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 SLC35E4Q6ICL7 350 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 C16orf87Q6PH81 154 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 TRAPPC6BQ86SZ2 158 aa13.14□□□□□ -0.31
GCDH-210ENST00000590445 PDZD9Q8IXQ8 264 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms