RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 PRR32B1ATL7 298 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 MCIDASD6RGH6 385 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ARPC1BO15143 372 aaKnown RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 NDUFA2O43678 99 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 CREBL2O60519 120 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF254O75437 659 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 RBMY1DP0C7P1 496 aaKnown RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 RPA2P15927 270 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 NFYAP23511 347 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 S100A11P31949 105 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 TAS2R20P59543 309 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 POU3F1Q03052 451 aaPredicted RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 CBFBQ13951 182 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF273Q14593 569 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 Q499Y3 187 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 Q6ZSV7 163 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 SLC16A9Q7RTY1 509 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 FAM122BQ7Z309 247 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 CDH26Q8IXH8 852 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 IQCF2Q8IXL9 164 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF440Q8IYI8 595 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 LYG1Q8N1E2 194 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 BEST4Q8NFU0 473 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 OR52E2Q8NGJ4 325 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 OR6N1Q8NGY5 312 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF671Q8TAW3 534 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ELMOD3Q96FG2 381 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 B9D2Q9BPU9 175 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ARPC5LQ9BPX5 153 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 SEC22CQ9BRL7 303 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF416Q9BWM5 594 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 NOX3Q9HBY0 568 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 EXOSC3Q9NQT5 275 aaKnown RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 TAS2R8Q9NYW2 309 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 FLVCR2Q9UPI3 526 aa6.39□□□□□ -1.39
SMAD4-209ENST00000589941 AK6Q9Y3D8 172 aaKnown RBP6.39□□□□□ -1.39
SMAD4-209ENST00000589941 IGKV1D-42A0A075B6H8 117 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SLC22A23A1A5C7 686 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 OR6C68A6NDL8 312 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 OR4C45A6NMZ5 311 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 GJE1A6NN92 205 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 L7N2F9 121 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SULT1C2O00338 296 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 XRCC3O43542 346 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 TRAF3IP2O43734 574 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 GPR137BO60478 399 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 DOK2O60496 412 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 MRPL33O75394 65 aaKnown RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SCO1O75880 301 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 ALDOBP05062 364 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 CRYBA1P05813 215 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 CDK2P24941 298 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 MPZP25189 248 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 FAUP35544 74 aaKnown RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 NUP62P37198 522 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SSBP2P81877 361 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 ALKBH1Q13686 389 aaKnown RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 RBMS2Q15434 407 aaKnown RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 DMRTC1Q5HYR2 192 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 DEFB121Q5J5C9 76 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SDR9C7Q8NEX9 313 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 OR1K1Q8NGR3 316 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 OR51A7Q8NH64 312 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 SYNPRQ8TBG9 265 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 GPR148Q8TDV2 347 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 MCHR2Q969V1 340 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 S100A16Q96FQ6 103 aaKnown RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 LINC00052Q96N35 136 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 ALKBH3Q96Q83 286 aaPredicted RBP6.38□□□□□ -1.39
SMAD4-209ENST00000589941 Q9N2J8 555 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 RDH8Q9NYR8 311 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF224Q9NZL3 707 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 GNG8Q9UK08 70 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 PRELID1Q9Y255 219 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 INSIG2Q9Y5U4 225 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 IER3IP1Q9Y5U9 82 aa6.38□□□□□ -1.39
SMAD4-209ENST00000589941 A0A1B0GTI1 187 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 MPTX1A8MV57 137 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 EIF4E2O60573 245 aaKnown RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 SELENOFO60613 162 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 NUDT14O95848 222 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 IGKV3-15P01624 115 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 GYPBP06028 91 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 HLA-GP17693 338 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 DCTDP32321 178 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 GABRA3P34903 492 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 EIF1P41567 113 aaKnown RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 CCL8P80075 99 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 MRPS11P82912 194 aaKnown RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 C4orf46Q504U0 113 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 ALG10BQ5I7T1 473 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 TMEM69Q5SWH9 247 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 HES5Q5TA89 166 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 PXDC1Q5TGL8 231 aa6.37□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF660Q6AZW8 331 aaPredicted RBP6.37□□□□□ -1.39
SMAD4-209ENST00000589941 ZNF813Q6ZN06 617 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms