RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 DUXBA0A1W2PPF3 345 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 CNOT4O95628 575 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 S100GP29377 79 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM268Q5VZI3 342 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 INO80CQ6PI98 192 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 IGFL2Q6UWQ7 119 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 VASH2Q86V25 355 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM56Q96MV1 263 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 TP53RKQ96S44 253 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 IL36RNQ9UBH0 155 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM56-RWDD3S4R434 201 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 MED12LQ86YW9 2145 aa16.36■□□□□ 0.21
PRKCSH-209ENST00000589838 TRAV17A0A0B4J275 112 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 TMEM218A2RU14 115 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 LRP5LA4QPB2 252 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 LILRA1O75019 489 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 SELEP16581 610 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 SULT1A2P50226 295 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 PPP1CBP62140 327 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 PMP22Q01453 160 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 GNMTQ14749 295 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 TSC22D1Q15714 1073 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 MEX3BQ6ZN04 569 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 TBC1D26Q86UD7 250 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 ZNF695Q8IW36 515 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 CMTM1Q8IZ96 169 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 UBAC2Q8NBM4 344 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 OR4A4PQ8NGN8 299 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 POLDIP2Q9Y2S7 368 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 SHANK1Q9Y566 2161 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 DEGS1O15121 323 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 IGHV1-2P23083 117 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 MDH2P40926 338 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 DEFA5Q01523 94 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 PJVKQ0ZLH3 352 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 FAM214BQ7L5A3 538 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 SLC35G3Q8N808 338 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 BOLLQ8N9W6 283 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 FDCSPQ8NFU4 85 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 MRPL30Q8TCC3 161 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 LRRC46Q96FV0 321 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 TRIB1Q96RU8 372 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 MS4A7Q9GZW8 240 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 ASCL3Q9NQ33 180 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 POMT1Q9Y6A1 747 aa16.35■□□□□ 0.21
PRKCSH-209ENST00000589838 AQP7O14520 342 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 HSPB6O14558 160 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 HS3ST1O14792 307 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 SMPD2O60906 423 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 GLI4P10075 376 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 RAC2P15153 192 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 SPATA46Q5T0L3 261 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 ZNF880Q6PDB4 577 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 OR4D5Q8NGN0 318 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 LHFPL5Q8TAF8 219 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 ABHD14BQ96IU4 210 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 ZNF488Q96MN9 340 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 TREM2Q9NZC2 230 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 BDP1A6H8Y1 2624 aa16.34■□□□□ 0.21
PRKCSH-209ENST00000589838 TRAV24A0A0B4J272 114 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 LOC105371267A0A1B0GV96 52 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 SPAARA0A1B0GVQ0 90 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 FAM76BQ5HYJ3 339 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 Q6ZT83 130 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 MOB1BQ7L9L4 216 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 OR52M1Q8NGK5 317 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 KIRREL1Q96J84 757 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 DLL3Q9NYJ7 618 aa16.33■□□□□ 0.21
PRKCSH-209ENST00000589838 DMDP11532 3685 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 TSPAN4O14817 238 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 MED6O75586 246 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 PVALBP20472 110 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 IDH3GP51553 393 aaPredicted RBP16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 HLA-DRB3P79483 266 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 HERPUD1Q15011 391 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 GABRA6Q16445 453 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 MST1LQ2TV78 715 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 PXDC1Q5TGL8 231 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 IGF2-ASQ6U949 168 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF818PQ6ZRF7 136 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 GAPTQ8N292 157 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 OR10J5Q8NHC4 309 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 RDH5Q92781 318 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 SARAFQ96BY9 339 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 ARV1Q9H2C2 271 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 PARD6AQ9NPB6 346 aa16.33■□□□□ 0.2
PRKCSH-209ENST00000589838 ATG12O94817 140 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF44P15621 663 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 RCC1P18754 421 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 NUBP1P53384 320 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 ZNF273Q14593 569 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 SELENOHQ8IZQ5 122 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 IL22RA2Q969J5 263 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 OR2J1Q9GZK6 312 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 PARP11Q9NR21 331 aa16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 FAM212BQ9NTI7 297 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 RCL1Q9Y2P8 373 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-209ENST00000589838 UCP1P25874 307 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 HOXC12P31275 282 aa16.31■□□□□ 0.2
PRKCSH-209ENST00000589838 GUSBP1Q15486 140 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms