RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 IGKV1D-12P01611 117 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 GABRR1P24046 479 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 MAPK3P27361 379 aaPredicted RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 DUSP1P28562 367 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 EDDM3BP56851 147 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 CTF1Q16619 201 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 DEFB112Q30KQ8 113 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 ACSM3Q53FZ2 586 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 NCR3LG1Q68D85 454 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 UNQ9370/PRO34162Q6UXP9 181 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 RNF144BQ7Z419 303 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 OR8H2Q8N162 312 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 ZDHHC22Q8N966 263 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 PPP1R35Q8TAP8 253 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 FAM216AQ8WUB2 273 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 TNFAIP8L1Q8WVP5 186 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 ZNF48Q96MX3 618 aaPredicted RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 DUX5Q96PT3 197 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 OR14A2Q96R54 314 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 ZMAT3Q9HA38 289 aaKnown RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 RHOFQ9HBH0 211 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 HMG20AQ9NP66 347 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 EXOSC4Q9NPD3 245 aaKnown RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 TMEM138Q9NPI0 162 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 ESM1Q9NQ30 184 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 TXNL4BQ9NX01 149 aaKnown RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 IL36RNQ9UBH0 155 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 RSL24D1Q9UHA3 163 aaKnown RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 GSTK1Q9Y2Q3 226 aa8.51□□□□□ -1.05
SDF2-208ENST00000589788 SOX21Q9Y651 276 aaPredicted RBP8.51□□□□□ -1.05
SDF2-208ENST00000589788 LOC100506127A0A0U1RQW1 187 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 MDFIC2A0A1B0GVS7 189 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 CCDC160A6NGH7 325 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 H3BMQ9 156 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 ZNF737O75373 536 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 ALDOBP05062 364 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 UCHL1P09936 223 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 PRTN3P24158 256 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 BDKRB2P30411 391 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 BMXP51813 675 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 ZP1P60852 638 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 UBA52P62987 128 aaKnown RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 PRB3Q04118 309 aaPredicted RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 ZNF146Q15072 292 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 RSU1Q15404 277 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 GRK1Q15835 563 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 DDI2Q5TDH0 399 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 ZNF529Q6P280 563 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 METAP1DQ6UB28 335 aaPredicted RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 CEACAM19Q7Z692 300 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 Q8N7P7 452 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 OR52N4Q8NGI2 321 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 OR51A2Q8NGJ7 313 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 GCDHQ92947 438 aaPredicted RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 SLC25A28Q96A46 364 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 DGCR14Q96DF8 476 aaKnown RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 SNX22Q96L94 193 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 DERL3Q96Q80 235 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 CENPOQ9BU64 300 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 CHST6Q9GZX3 395 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 SEBOXQ9HB31 216 aaPredicted RBP8.5□□□□□ -1.05
SDF2-208ENST00000589788 NOX4Q9NPH5 578 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 FAM96BQ9Y3D0 163 aa8.5□□□□□ -1.05
SDF2-208ENST00000589788 TRBV5-7A0A0A0MS05 114 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PRD5 423 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PRF3 423 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PRM7 423 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 SIRPB1O00241 398 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 SLC22A1O15245 554 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 ARL6IP5O75915 188 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 ZNF44P15621 663 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 ZNF93P35789 620 aaPredicted RBP8.49□□□□□ -1.05
SDF2-208ENST00000589788 MTNR1BP49286 362 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 DLX1P56177 255 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 NCS1P62166 190 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 LSM3P62310 102 aaKnown RBP8.49□□□□□ -1.05
SDF2-208ENST00000589788 SCN1BQ07699 218 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 KLRD1Q13241 179 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 INSL4Q14641 139 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 C22orf42Q6IC83 251 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 ASPHD2Q6ICH7 369 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 C17orf107Q6ZR85 190 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 PXT1Q8NFP0 134 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 ORAI1Q96D31 301 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 KCTD7Q96MP8 289 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 S100A13Q99584 98 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 HEXA-AS1Q9H8Q6 139 aa8.49□□□□□ -1.05
SDF2-208ENST00000589788 UNKLQ9H9P5 680 aaKnown RBP8.49□□□□□ -1.05
SDF2-208ENST00000589788 A0A0U1RQK1 487 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 hADV38S2A0JD32 116 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 RNASEK-C17orf49H0YIS7 233 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 CLDN34H7C241 214 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 MGST3O14880 152 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 DEGS1O15121 323 aa8.48□□□□□ -1.05
SDF2-208ENST00000589788 NPFFO15130 113 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms