RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 TMEM183AQ8IXX5 376 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 CXorf1O96002 111 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 TCL1AP56279 114 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 Q56UQ5 140 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 CPEB3Q8NE35 698 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 SRD5A3Q9H8P0 318 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 ISLRO14498 428 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 CT62P0C5K7 136 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 HINT1P49773 126 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 PRDX4Q13162 271 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2D3Q8NGH3 330 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 RNF133Q8WVZ7 376 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 SRSF10O75494 262 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 KIR3DL2P43630 455 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 RAB7AP51149 207 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 PCGF1Q9BSM1 259 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
SMARCA4-214ENST00000589677 HELTA6NFD8 242 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 C1QCP02747 245 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 MRPL54Q6P161 138 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 TMEM178AQ8NBL3 297 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 OR10AD1Q8NGE0 317 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 OR6X1Q8NH79 312 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 IER2Q9BTL4 223 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 H0YL77 283 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 H3BMH7 237 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 CD160O95971 181 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 CD74P04233 296 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 KLK2P20151 261 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 CCR5P51681 352 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 RPS4XP62701 263 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2V1Q8NHB1 315 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 SPACA9Q96E40 222 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 NINQ8N4C6 2090 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 LSM6P62312 80 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 CBLN3Q6UW01 205 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 FCGR3BO75015 233 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 SP1P08047 785 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 ZGLP1P0C6A0 271 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 MLF2Q15773 248 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 ATRAIDQ6UW56 229 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 D2HGDHQ8N465 521 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 RHBDD1Q8TEB9 315 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 BOD1Q96IK1 185 aa12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-214ENST00000589677 EVPLQ92817 2033 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 F2RP25116 425 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 ZNF547Q8IVP9 402 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 TMEM252Q8N6L7 170 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 OR13G1Q8NGZ3 307 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 TUBA4BQ9H853 241 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 SLC2A8Q9NY64 477 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 A0A1W2PQD3 144 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 SMPD2O60906 423 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 HOXA5P20719 270 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 WFIKKN1Q96NZ8 548 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 PRSS27Q9BQR3 290 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 COL25A1Q9BXS0 654 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 EGLN1Q9GZT9 426 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2D2Q9H210 308 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 AAMDCQ9H7C9 122 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 RND3P61587 244 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 GNB1P62873 340 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 MEF2BQ02080 365 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 SPPL3Q8TCT6 385 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2W5A6NFC9 320 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 OR2J3O76001 311 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 P2RY4P51582 365 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 EFNB1P98172 346 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 AQP3Q92482 292 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 FER1L6-AS2Q96M78 137 aa12.86□□□□□ -0.35
SMARCA4-214ENST00000589677 LRRC3CA6NJW4 275 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 CORTO00230 105 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 RNF224P0DH78 156 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 GLRX5Q86SX6 157 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 APCDD1LQ8NCL9 501 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 WIPI2Q9Y4P8 454 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 TRBV5-7A0A0A0MS05 114 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 LILRA5A6NI73 299 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 C1QL1O75973 258 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 CXCL12P48061 93 aa12.85□□□□□ -0.35
SMARCA4-214ENST00000589677 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms