RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CHST6Q9GZX3 395 aa10.08□□□□□ -0.8
DNMT1-218ENST00000589294 PPA2Q9H2U2 334 aa10.08□□□□□ -0.8
DNMT1-218ENST00000589294 MMP27Q9H306 513 aa10.08□□□□□ -0.8
DNMT1-218ENST00000589294 ZNF581Q9P0T4 197 aa10.08□□□□□ -0.8
DNMT1-218ENST00000589294 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
DNMT1-218ENST00000589294 ZNF469Q96JG9 3925 aaPredicted RBP10.08□□□□□ -0.8
DNMT1-218ENST00000589294 HIVEP1P15822 2718 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 TRAV20A0A0B4J274 112 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 SMAD7O15105 426 aaKnown RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 XRCC3O43542 346 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 CD99P14209 185 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 GATA3P23771 443 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 P2RX3P56373 397 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 RPL31P62899 125 aaKnown RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 LCN2P80188 198 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 PAX2Q02962 417 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 AESQ08117 197 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 PLAC9Q5JTB6 97 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 KRBOX4Q5JUW0 171 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 NKAPLQ5M9Q1 402 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 METAP1DQ6UB28 335 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 C6orf201Q7Z4U5 140 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 GAPTQ8N292 157 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 CORO2AQ92828 525 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 MSI2Q96DH6 328 aaKnown RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 ARHGAP5-AS1Q96IT6 56 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 DCUN1D5Q9BTE7 237 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 FAAP24Q9BTP7 215 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 RIMS4Q9H426 269 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 RPUSD1Q9UJJ7 312 aaKnown RBP10.07□□□□□ -0.8
DNMT1-218ENST00000589294 CELSR1Q9NYQ6 3014 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 ACANP16112 2415 aa10.07□□□□□ -0.8
DNMT1-218ENST00000589294 A0A1W2PPH5 198 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 UBE2QL1A1L167 161 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 HSPB6O14558 160 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 CTDSP2O14595 271 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ENSAO43768 121 aaKnown RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 HPGDSO60760 199 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 TPPPO94811 219 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 TGFAP01135 160 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 MT-ND4P03905 459 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 GSTP1P09211 210 aaKnown RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 INHBBP09529 407 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ELK1P19419 428 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 DVL1P1P54792 670 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 EDDM3BP56851 147 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 MOGAT2Q3SYC2 334 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 CDNFQ49AH0 187 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 TMEM200BQ69YZ2 307 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ZNF497Q6ZNH5 498 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 C1orf122Q6ZSJ8 110 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 FGFRL1Q8N441 504 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ZNF565Q8N9K5 539 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 DACT3Q96B18 629 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 COQ2Q96H96 371 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 SULT4A1Q9BR01 284 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 PECRQ9BY49 303 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ETAA1Q9NY74 926 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 ADAM30Q9UKF2 790 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 DOCK11Q5JSL3 2073 aa10.06□□□□□ -0.8
DNMT1-218ENST00000589294 IGHV2-70DA0A0C4DH43 119 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 TMEM30CPA0ZSE6 113 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 ODAMA1E959 279 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 SERPINE3A8MV23 424 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 C22orf46C9J442 243 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 RGS5O15539 181 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 EIF4EP06730 217 aaKnown RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 HIST1H1DP16402 221 aaKnown RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 GZMHP20718 246 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 CDK2P24941 298 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 GLIPR1P48060 266 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 EDDM3AQ14507 147 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 ATXN7L3Q14CW9 347 aaPredicted RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 PNLIPRP3Q17RR3 467 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 CR1LQ2VPA4 569 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 BTNL3Q6UXE8 466 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 GLCCI1Q86VQ1 547 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 OR4M1Q8NGD0 313 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 PLPPR1Q8TBJ4 325 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 TMEM186Q96B77 213 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 C6orf62Q9GZU0 229 aaPredicted RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 MMP26Q9NRE1 261 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 OR6C3Q9NZP0 311 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 KCNK7Q9Y2U2 307 aa10.05□□□□□ -0.8
DNMT1-218ENST00000589294 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 YLPM1P49750 1951 aaKnown RBP10.05□□□□□ -0.8
DNMT1-218ENST00000589294 CSPG4Q6UVK1 2322 aa10.04□□□□□ -0.8
DNMT1-218ENST00000589294 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
DNMT1-218ENST00000589294 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
DNMT1-218ENST00000589294 TRGV10A0A0A0MS01 117 aa10.04□□□□□ -0.8
DNMT1-218ENST00000589294 TRBV6-6A0A0A6YYG2 114 aa10.04□□□□□ -0.8
DNMT1-218ENST00000589294 A0A0G2JMP0 313 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms