RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CD276Q5ZPR3 534 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 TMEM200BQ69YZ2 307 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 CLEC9AQ6UXN8 241 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 Q71RC1 249 aaPredicted RBP8.83□□□□□ -1
SMARCA4-213ENST00000587988 GDPD3Q7L5L3 318 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 TCF23Q7RTU1 214 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 GLCCI1Q86VQ1 547 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 FAM185AQ8N0U4 392 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 C8orf46Q8TAG6 207 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PTX4Q96A99 478 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 POM121Q96HA1 1249 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 ARHGAP5-AS1Q96IT6 56 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 NEDD4LQ96PU5 975 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 FAAP24Q9BTP7 215 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 MRI1Q9BV20 369 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 ATG5Q9H1Y0 275 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 COMMD3Q9UBI1 195 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 ETV7Q9Y603 341 aa8.83□□□□□ -1
SMARCA4-213ENST00000587988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -13e-6■■■■■ 29.6
SMARCA4-213ENST00000587988 CSPG4Q6UVK1 2322 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 TRAV39A0A0B4J263 110 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 MCRIP1C9JLW8 97 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 ZNF701M0R085 212 aaPredicted RBP8.82□□□□□ -1
SMARCA4-213ENST00000587988 ENSAO43768 121 aaKnown RBP8.82□□□□□ -1
SMARCA4-213ENST00000587988 AVPP01185 164 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 ERP29P30040 261 aaKnown RBP8.82□□□□□ -1
SMARCA4-213ENST00000587988 P2RX3P56373 397 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 ERVFRD-1P60508 538 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 PAX8Q06710 450 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 C11orf91Q3C1V1 193 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 DCAF12L2Q5VW00 463 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 OLFML2AQ68BL7 652 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 FAHD2BQ6P2I3 314 aaPredicted RBP8.82□□□□□ -1
SMARCA4-213ENST00000587988 Q6ZTK2 550 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 CMTM4Q8IZR5 234 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 OR56B1Q8NGI3 324 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 OR10R2Q8NGX6 335 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 NEK7Q8TDX7 302 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 KCTD12Q96CX2 325 aaKnown RBP8.82□□□□□ -1
SMARCA4-213ENST00000587988 FAHD2AQ96GK7 314 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 PECRQ9BY49 303 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 TMPRSS13Q9BYE2 586 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 SPACA1Q9HBV2 294 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 YAE1D1Q9NRH1 226 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 PLEKHJ1Q9NW61 149 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 RHBDL2Q9NX52 303 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 KIF25Q9UIL4 384 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 KCNK7Q9Y2U2 307 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
SMARCA4-213ENST00000587988 KIAA2026Q5HYC2 2103 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 HIVEP1P15822 2718 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 TRBV23-1A0A0A0MS06 115 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 A0A1W2PQ09 198 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ODAMA1E959 279 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 METTL21EPA6NDL7 271 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 A6NHS1 94 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 GLAP06280 429 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 EIF4EP06730 217 aaKnown RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 GNB3P16520 340 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 CCL3L1P16619 93 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 KCNJ3P48549 501 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 DLX1P56177 255 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ARF6P62330 175 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 RBM39Q14498 530 aaKnown RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 SLC35E4Q6ICL7 350 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 BTNL3Q6UXE8 466 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ZNF497Q6ZNH5 498 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 C1orf229Q6ZS94 237 aaPredicted RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 SAMD12Q8N8I0 201 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 DTX3Q8N9I9 347 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 OR13A1Q8NGR1 328 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 CCDC107Q8WV48 283 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 DGCR14Q96DF8 476 aaKnown RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 RAB3CQ96E17 227 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 DCUN1D5Q9BTE7 237 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 C7orf69Q9H7B7 122 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 ETAA1Q9NY74 926 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 CCDC59Q9P031 241 aaKnown RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 NDUFA13Q9P0J0 144 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ONECUT1Q9UBC0 465 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 OPN4Q9UHM6 478 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 ELF5Q9UKW6 265 aaPredicted RBP8.81□□□□□ -1
SMARCA4-213ENST00000587988 KCNS2Q9ULS6 477 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 HSF4Q9ULV5 492 aa8.81□□□□□ -1
SMARCA4-213ENST00000587988 F8P00451 2351 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 A0A075B6Q4 140 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 MEIKINA0A087WXM9 373 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 A0A0G2JMP0 313 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 A0A0X1KG70 313 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 hADV38S2A0JD32 116 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 A8MV72 311 aaPredicted RBP8.8□□□□□ -1
SMARCA4-213ENST00000587988 CTDSP2O14595 271 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 HPGDSO60760 199 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 MT-ND4P03905 459 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 LIPFP07098 398 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 MMP9P14780 707 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 CDK2P24941 298 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 SOX6P35712 828 aa8.8□□□□□ -1
SMARCA4-213ENST00000587988 DLX6P56179 175 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms