RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 RAB22AQ9UL26 194 aa15.79■□□□□ 0.12
DDX39A-204ENST00000586558 LINC00312Q9Y6C7 94 aa15.79■□□□□ 0.12
DDX39A-204ENST00000586558 TMEM272A0A1B0GTI8 110 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 MCRIP1C9JLW8 97 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 HSPB6O14558 160 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 SLC2A2P11168 524 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-204ENST00000586558 VBP1P61758 197 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 ARF6P62330 175 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 AESQ08117 197 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 BLMHQ13867 455 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 ATXN7L3Q14CW9 347 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-204ENST00000586558 KRBOX4Q5JUW0 171 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 C1orf229Q6ZS94 237 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-204ENST00000586558 FAM89BQ8N5H3 189 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 COQ2Q96H96 371 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 NEDD4LQ96PU5 975 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 NAA50Q9GZZ1 169 aaKnown RBP15.78■□□□□ 0.12
DDX39A-204ENST00000586558 SIRPDQ9H106 197 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 PEX16Q9Y5Y5 336 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 WNK2Q9Y3S1 2297 aa15.78■□□□□ 0.12
DDX39A-204ENST00000586558 FN1P02751 2386 aaKnown RBP15.77■□□□□ 0.12
DDX39A-204ENST00000586558 hCG_1809904A0A1W2PP81 198 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 A0A1W2PPE2 198 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 A0A1W2PR64 198 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 A0A1W2PRV1 198 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 ODAMA1E959 279 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 CRLF1O75462 422 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 CA11O75493 328 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 TOX4O94842 621 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 AVPP01185 164 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 RBP4P02753 201 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 MMP9P14780 707 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 TGFBR1P36897 503 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 RPS19P39019 145 aaKnown RBP15.77■□□□□ 0.12
DDX39A-204ENST00000586558 SERPINB10P48595 397 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 TMBIM6P55061 237 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 CHRFAM7AQ494W8 412 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 SIGIRRQ6IA17 410 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 BPIFB2Q8N4F0 458 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 OR56B1Q8NGI3 324 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 NANPQ8TBE9 248 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 NEK7Q8TDX7 302 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 RAB2BQ8WUD1 216 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 METTL8Q9H825 291 aaKnown RBP15.77■□□□□ 0.12
DDX39A-204ENST00000586558 UNKLQ9H9P5 680 aaKnown RBP15.77■□□□□ 0.12
DDX39A-204ENST00000586558 OR6C3Q9NZP0 311 aa15.77■□□□□ 0.12
DDX39A-204ENST00000586558 ARHGAP32A7KAX9 2087 aa15.77■□□□□ 0.11
DDX39A-204ENST00000586558 TRGV10A0A0A0MS01 117 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 FSHBP01225 129 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF728P0DKX0 622 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 CHATP28329 748 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 SRP14P37108 136 aaKnown RBP15.76■□□□□ 0.11
DDX39A-204ENST00000586558 GLIPR1P48060 266 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF273Q14593 569 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 RSBN1Q5VWQ0 802 aaPredicted RBP15.76■□□□□ 0.11
DDX39A-204ENST00000586558 SLC35E4Q6ICL7 350 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 USP43Q70EL4 1123 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 CLVS1Q8IUQ0 354 aaPredicted RBP15.76■□□□□ 0.11
DDX39A-204ENST00000586558 CORO2AQ92828 525 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 SLC25A46Q96AG3 418 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 NICN1Q9BSH3 213 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 PCGF1Q9BSM1 259 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 KIF25Q9UIL4 384 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 UBE2J1Q9Y385 318 aaPredicted RBP15.76■□□□□ 0.11
DDX39A-204ENST00000586558 ETV7Q9Y603 341 aa15.76■□□□□ 0.11
DDX39A-204ENST00000586558 A0A0B4J203 849 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TMEM30CPA0ZSE6 113 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 BLVRBP30043 206 aaPredicted RBP15.75■□□□□ 0.11
DDX39A-204ENST00000586558 SCGB2A2Q13296 93 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 IDNKQ5T6J7 187 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TCF23Q7RTU1 214 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TRAPPC6BQ86SZ2 158 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TPRX1Q8N7U7 411 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 PLPPR1Q8TBJ4 325 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 LGALS14Q8TCE9 139 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF714Q96N38 554 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TBX15Q96SF7 602 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 TAS2R3Q9NYW6 316 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 ABRACLQ9P1F3 81 aa15.75■□□□□ 0.11
DDX39A-204ENST00000586558 NAV3Q8IVL0 2385 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 MEIKINA0A087WXM9 373 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 A0A0A6YYD4 124 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 NOL3O60936 208 aaKnown RBP15.74■□□□□ 0.11
DDX39A-204ENST00000586558 SNRPBP14678 240 aaKnown RBP15.74■□□□□ 0.11
DDX39A-204ENST00000586558 SRD5A1P18405 259 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 PRTN3P24158 256 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 DLX6P56179 175 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 NKAPLQ5M9Q1 402 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 ZNF497Q6ZNH5 498 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 IL17RELQ6ZVW7 336 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 VMO1Q7Z5L0 202 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 Q8N7P7 452 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 KCTD12Q96CX2 325 aaKnown RBP15.74■□□□□ 0.11
DDX39A-204ENST00000586558 GAL3ST2Q9H3Q3 398 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 ETAA1Q9NY74 926 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 HSF4Q9ULV5 492 aa15.74■□□□□ 0.11
DDX39A-204ENST00000586558 FOXI3A8MTJ6 420 aaPredicted RBP15.73■□□□□ 0.11
DDX39A-204ENST00000586558 C17orf98A8MV24 154 aa15.73■□□□□ 0.11
DDX39A-204ENST00000586558 SCGNO76038 276 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms