RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 H2AFY2Q9P0M6 372 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-225ENST00000586385 WARS2Q9UGM6 360 aaKnown RBP9.32□□□□□ -0.92
BRCA1-225ENST00000586385 GLS2Q9UI32 602 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 BIRC6Q9NR09 4857 aa9.32□□□□□ -0.92
BRCA1-225ENST00000586385 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
BRCA1-225ENST00000586385 FUOMA2VDF0 154 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 ZFPL1O95159 310 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 CYB5AP00167 134 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 UBCP0CG48 685 aaKnown RBP9.31□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF44P15621 663 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 PRKACBP22694 351 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 HTR1FP30939 366 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 POLR2IP36954 125 aaKnown RBP9.31□□□□□ -0.92
BRCA1-225ENST00000586385 ZP1P60852 638 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 EBI3Q14213 229 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 CASC10Q5T4H9 136 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 SPATA24Q86W54 205 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 COMMD1Q8N668 190 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 OR10H4Q8NGA5 316 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 OR51T1Q8NGJ9 327 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 SPSB1Q96BD6 273 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 ADI1Q9BV57 179 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 OSBPL10Q9BXB5 764 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 KIF25Q9UIL4 384 aa9.31□□□□□ -0.92
BRCA1-225ENST00000586385 DNAH7Q8WXX0 4024 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 TRAV24A0A0B4J272 114 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 A0A1W2PPE3 182 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 MT-ND2P03891 347 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 HOXB6P17509 224 aaKnown RBP9.3□□□□□ -0.92
BRCA1-225ENST00000586385 ECI1P42126 302 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 GLP1RP43220 463 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 GPR12P47775 334 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 RAB25P57735 213 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 CFHR3Q02985 330 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 MADCAM1Q13477 382 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 HES1Q14469 280 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 KIR2DS1Q14954 304 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 KDM4DQ6B0I6 523 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 FAM53AQ6NSI3 398 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-225ENST00000586385 OR8H3Q8N146 312 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 CHST4Q8NCG5 386 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 OR13C9Q8NGT0 318 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 RFESDQ8TAC1 157 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 PRRG3Q9BZD7 231 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 PCDHB16Q9NRJ7 776 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 PLSCR3Q9NRY6 295 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 KRT84Q9NSB2 600 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 IDI2-AS1Q9NZ38 188 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 OR6C3Q9NZP0 311 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 GNG8Q9UK08 70 aa9.3□□□□□ -0.92
BRCA1-225ENST00000586385 IGHV3-72A0A0B4J1Y9 119 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 TRAV39A0A0B4J263 110 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 HSPB6O14558 160 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 DEGS1O15121 323 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 IL1AP01583 271 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 ISG15P05161 165 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 SSTR5P35346 364 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-225ENST00000586385 GNG10P50151 68 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 SLC35B1P78383 322 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 FHL3Q13643 280 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 FLOT2Q14254 428 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 LTC4SQ16873 150 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 C9orf66Q5T8R8 295 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 ASPHD1Q5U4P2 390 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 RSBN1Q5VWQ0 802 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-225ENST00000586385 FDX2Q6P4F2 183 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 SAXO1Q8IYX7 474 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 Q8N9W7 124 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 MUC7Q8TAX7 377 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 EME1Q96AY2 570 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 EAF1Q96JC9 268 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-225ENST00000586385 HRASLS5Q96KN8 279 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 ABCG5Q9H222 651 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 NCOR1P1Q9H4R4 102 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 ZMAT5Q9UDW3 170 aaKnown RBP9.29□□□□□ -0.92
BRCA1-225ENST00000586385 POMPQ9Y244 141 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 MYRFQ9Y2G1 1151 aa9.29□□□□□ -0.92
BRCA1-225ENST00000586385 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-225ENST00000586385 MEIKINA0A087WXM9 373 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 IGHV1-3A0A0C4DH29 117 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 SEC14L6B5MCN3 397 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 H0YJX3 145 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 J3QRE1 110 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF20P17024 532 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 CHATP28329 748 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 REG1BP48304 166 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 RAB7AP51149 207 aa9.28□□□□□ -0.92
BRCA1-225ENST00000586385 GP2P55259 537 aaKnown RBP9.28□□□□□ -0.92
BRCA1-225ENST00000586385 ZNF816Q0VGE8 651 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms