RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 DECR2Q9NUI1 292 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 C1orf123Q9NWV4 160 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 MEIOCA2RUB1 952 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 DEGS1O15121 323 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 RP2O75695 350 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 RAB3DO95716 219 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 IFNA6P05013 189 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 FOSL1P15407 271 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 EFNA4P52798 201 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 ATP5J2P56134 94 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 CDK10Q15131 360 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
VMP1-202ENST00000585847 GRK1Q15835 563 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 PRAMEF6Q5VXH4 476 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 SIGIRRQ6IA17 410 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 ACP7Q6ZNF0 438 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 C11orf53Q8IXP5 236 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 LRRC29Q8WV35 223 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 NEU4Q8WWR8 484 aaPredicted RBP10.6□□□□□ -0.71
VMP1-202ENST00000585847 SNAPC3Q92966 411 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 PPP1R14BQ96C90 147 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 DPCDQ9BVM2 203 aaPredicted RBP10.6□□□□□ -0.71
VMP1-202ENST00000585847 RAB1BQ9H0U4 201 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 GSX1Q9H4S2 264 aaPredicted RBP10.6□□□□□ -0.71
VMP1-202ENST00000585847 ZNF286AQ9HBT8 521 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 DCAF16Q9NXF7 216 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 OPN4Q9UHM6 478 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 PPP1R3CQ9UQK1 317 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
VMP1-202ENST00000585847 FLNAP21333 2647 aaKnown RBP10.6□□□□□ -0.71
VMP1-202ENST00000585847 IGHV3-64DA0A0J9YX35 117 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 NDUFA2O43678 99 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 LANCL1O43813 399 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 RHBDL1O75783 438 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 HAND1O96004 215 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 NAPSAO96009 420 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 DHFRP00374 187 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 LHBP01229 141 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 TRAPPC2P0DI81 140 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 TRAPPC2BP0DI82 140 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 ZNF44P15621 663 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 AMY2BP19961 511 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 MECP2P51608 486 aaKnown RBP10.59□□□□□ -0.71
VMP1-202ENST00000585847 SEC61A1P61619 476 aaKnown RBP10.59□□□□□ -0.71
VMP1-202ENST00000585847 HOXA4Q00056 320 aaPredicted RBP10.59□□□□□ -0.71
VMP1-202ENST00000585847 MPPED2Q15777 294 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 TMEM30BQ3MIR4 351 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 BTN2A1Q7KYR7 527 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 C6orf201Q7Z4U5 140 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 BEST4Q8NFU0 473 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 OR5AP2Q8NGF4 316 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 OR5H2Q8NGV7 314 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 OR4K15Q8NH41 348 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 GCM1Q9NP62 436 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 DLL4Q9NR61 685 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 NLKQ9UBE8 527 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 DNAJB11Q9UBS4 358 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 SLC23A1Q9UHI7 598 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 ACANP16112 2415 aa10.59□□□□□ -0.71
VMP1-202ENST00000585847 TRAV38-1A0A0B4J264 116 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 CEACAM18A8MTB9 384 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 SSX5O60225 188 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 NDUFB6O95139 128 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 CD3DP04234 171 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 FCER2P06734 321 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 FCGR3AP08637 254 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 OR3A3P47888 321 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 SNU13P55769 128 aaKnown RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 ARPC4P59998 168 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 MICBQ29980 383 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 CHRFAM7AQ494W8 412 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 PAN3Q58A45 887 aaKnown RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 TEX36Q5VZQ5 186 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 Q6P435 159 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 ZNF782Q6ZMW2 699 aaPredicted RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 ZNF525Q8N782 197 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 DTX3Q8N9I9 347 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 SUMF2Q8NBJ7 301 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 CCDC107Q8WV48 283 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 MED30Q96HR3 178 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 SULT4A1Q9BR01 284 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 ALX4Q9H161 411 aaPredicted RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 ZMAT3Q9HA38 289 aaKnown RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 MYOZ1Q9NP98 299 aaPredicted RBP10.58□□□□□ -0.72
VMP1-202ENST00000585847 NECAP2Q9NVZ3 263 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 ETAA1Q9NY74 926 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 AK3Q9UIJ7 227 aa10.58□□□□□ -0.72
VMP1-202ENST00000585847 YLPM1P49750 1951 aaKnown RBP10.57□□□□□ -0.72
VMP1-202ENST00000585847 PIGBOS1A0A0B4J2F0 54 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 TMEM30CPA0ZSE6 113 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 NKX6-3A6NJ46 265 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
VMP1-202ENST00000585847 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms