RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 LINC01548A6NM66 108 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 H0YHG0 523 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 J3QRE1 110 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 FGF16O43320 207 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 IGHG2P01859 326 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 ZNF44P15621 663 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 NFYBP25208 207 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 CCR9P51686 369 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 DGCR2P98153 550 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 DCTN2Q13561 401 aaKnown RBP11.41□□□□□ -0.58
SDF2-202ENST00000585428 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 ZDHHC13Q8IUH4 622 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 DRAM1Q8N682 238 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 OR51A4Q8NGJ6 313 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 RPEQ96AT9 228 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 CIB1Q99828 191 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 ING3Q9NXR8 418 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 PSG11Q9UQ72 335 aa11.41□□□□□ -0.58
SDF2-202ENST00000585428 LSM4Q9Y4Z0 139 aaKnown RBP11.41□□□□□ -0.58
SDF2-202ENST00000585428 NPIPB11E5RHQ5 1161 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 ZNF20P17024 532 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 EBI3Q14213 229 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 SLC16A12Q6ZSM3 486 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 OR5D18Q8NGL1 313 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 OR10AC1Q8NH08 325 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 OR56B4Q8NH76 319 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 RFKQ969G6 155 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 TOMM40LQ969M1 308 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 OSBPL10Q9BXB5 764 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 LINC00527Q9UJ94 153 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.58
SDF2-202ENST00000585428 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 SERPINE3A8MV23 424 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 RAMP3O60896 148 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
SDF2-202ENST00000585428 RAB7AP51149 207 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 ZP1P60852 638 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 PAX5Q02548 391 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 MADCAM1Q13477 382 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 HNF4GQ14541 408 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 ATXN7L3Q14CW9 347 aaPredicted RBP11.39□□□□□ -0.59
SDF2-202ENST00000585428 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 AMIGO2Q86SJ2 522 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 OR8H3Q8N146 312 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 STPG2Q8N412 459 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 OR13A1Q8NGR1 328 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 HAVCR2Q8TDQ0 301 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 TFAP2CQ92754 450 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 LEAP2Q969E1 77 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 RAX2Q96IS3 184 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 GABARAPL3Q9BY60 117 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 ZCCHC4Q9H5U6 513 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 CALYQ9NYX4 217 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
SDF2-202ENST00000585428 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
SDF2-202ENST00000585428 TRAV24A0A0B4J272 114 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 CCL24O00175 119 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 SLC16A6O15403 523 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 OCM2P0CE71 109 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
SDF2-202ENST00000585428 TMEM225BP0DP42 221 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 DBTP11182 482 aaKnown RBP11.38□□□□□ -0.59
SDF2-202ENST00000585428 TMEM11P17152 192 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 FASP25445 335 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 GP2P55259 537 aaKnown RBP11.38□□□□□ -0.59
SDF2-202ENST00000585428 SLC35B1P78383 322 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 HES1Q14469 280 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 KISS1Q15726 138 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 NKAPLQ5M9Q1 402 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 SLC25A30Q5SVS4 291 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 TEX38Q6PEX7 206 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 Q8NFD4 153 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 OR10A7Q8NGE5 316 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 OR13C3Q8NGS6 347 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 OR13C9Q8NGT0 318 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 CNIH3Q8TBE1 160 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 TRUB1Q8WWH5 349 aaKnown RBP11.38□□□□□ -0.59
SDF2-202ENST00000585428 DUX3Q96PT4 197 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 BARHL1Q9BZE3 327 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 DCLRE1BQ9H816 532 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 KIF25Q9UIL4 384 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 AP4S1Q9Y587 144 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 U3KQK5 164 aa11.38□□□□□ -0.59
SDF2-202ENST00000585428 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 DAPL1A0PJW8 107 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 NUDT19A8MXV4 375 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 H0YJX3 145 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 ZFPL1O95159 310 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 IL1AP01583 271 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 IGKV1D-33P01593 117 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 IGKV1-33P01594 117 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 HTR1AP08908 422 aa11.37□□□□□ -0.59
SDF2-202ENST00000585428 MTNR1BP49286 362 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms