RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 MNDAP41218 407 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 SOX2P48431 317 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 CD83Q01151 205 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 LTC4SQ16873 150 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 C17orf58Q2M2W7 97 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 TNFAIP8L1Q8WVP5 186 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 PHF21AQ96BD5 680 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 C9orf16Q9BUW7 83 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 INPP5EQ9NRR6 644 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 NECAP2Q9NVZ3 263 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 KIF25Q9UIL4 384 aa16.32■□□□□ 0.2
TOP3A-219ENST00000584887 KBTBD11-OT1A0A1B0GTJ5 212 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 MAGEB3O15480 346 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 PF4P02776 101 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 RPSAP08865 295 aaKnown RBP16.31■□□□□ 0.2
TOP3A-219ENST00000584887 RAB3AP20336 220 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 CCDC144NLQ6NUI1 221 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 OR52I1Q8NGK6 324 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 OR10K1Q8NGX5 313 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 RHOXF1Q8NHV9 184 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 LEAP2Q969E1 77 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 TOMM40LQ969M1 308 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 RPEQ96AT9 228 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 CPNE2Q96FN4 548 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-219ENST00000584887 RBM14Q96PK6 669 aaKnown RBP16.31■□□□□ 0.2
TOP3A-219ENST00000584887 CALYQ9NYX4 217 aa16.31■□□□□ 0.2
TOP3A-219ENST00000584887 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-219ENST00000584887 ALX3O95076 343 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 RAB40BQ12829 278 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 MRPL28Q13084 256 aaKnown RBP16.3■□□□□ 0.2
TOP3A-219ENST00000584887 RSU1Q15404 277 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 OR4X2Q8NGF9 303 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 OR51A2Q8NGJ7 313 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 OR13A1Q8NGR1 328 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 OR9G1Q8NH87 305 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 KIRREL1Q96J84 757 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 SLC29A1Q99808 456 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 TAS2R4Q9NYW5 299 aa16.3■□□□□ 0.2
TOP3A-219ENST00000584887 RPL36Q9Y3U8 105 aaKnown RBP16.3■□□□□ 0.2
TOP3A-219ENST00000584887 AMMECR1Q9Y4X0 333 aaPredicted RBP16.3■□□□□ 0.2
TOP3A-219ENST00000584887 TRAV24A0A0B4J272 114 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 GABRPO00591 440 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 IGLL1P15814 213 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 GTF2A1P52655 376 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-219ENST00000584887 LOXL3P58215 753 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 PIGYQ3MUY2 71 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 TCTEX1D4Q5JR98 221 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 C10orf99Q6UWK7 81 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 ZNF565Q8N9K5 539 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 PXT1Q8NFP0 134 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 OR51T1Q8NGJ9 327 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 CNIH3Q8TBE1 160 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 MYDGFQ969H8 173 aa16.29■□□□□ 0.2
TOP3A-219ENST00000584887 AURKAIP1Q9NWT8 199 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-219ENST00000584887 TSSC4Q9Y5U2 329 aaPredicted RBP16.29■□□□□ 0.2
TOP3A-219ENST00000584887 A0A087X0M5 115 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 LOC100130705A0A1B0GUX0 176 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 A0A1B0GX30 115 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 OOSP1A8MZH6 123 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 LY6LH3BQJ8 138 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 HTR3BO95264 441 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 FAM106CPP0CH98 169 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 GNG10P50151 68 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 ELP2Q6IA86 826 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 OR56B4Q8NH76 319 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 RFESDQ8TAC1 157 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 MRGPRDQ8TDS7 321 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 RGP1Q92546 391 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-219ENST00000584887 ZNF649Q9BS31 505 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 JAM3Q9BX67 310 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 BARHL1Q9BZE3 327 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 IDI2-AS1Q9NZ38 188 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 MOB4Q9Y3A3 225 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 HSPE1-MOB4S4R3N1 261 aa16.28■□□□□ 0.2
TOP3A-219ENST00000584887 TRAV39A0A0B4J263 110 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 M0QZK8 103 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 AMY1AP04745 511 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 AMY2AP04746 511 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 CD2P06729 351 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 SNRNP70P08621 437 aaKnown RBP16.27■□□□□ 0.2
TOP3A-219ENST00000584887 C21orf33P30042 268 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-219ENST00000584887 HES1Q14469 280 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 IL13RA2Q14627 380 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 KLHL22Q53GT1 634 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 FOXB2Q5VYV0 432 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 C10orf67Q8IYJ2 551 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 PLPPR1Q8TBJ4 325 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 PCDHB16Q9NRJ7 776 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 FAM118AQ9NWS6 357 aa16.27■□□□□ 0.2
TOP3A-219ENST00000584887 J3QR06 171 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 CDRT1O95170 752 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 IL1AP01583 271 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 LIMS3P0CW19 117 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 LIMS4P0CW20 117 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 PPP3R1P63098 170 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 SMN1Q16637 294 aaKnown RBP16.26■□□□□ 0.19
TOP3A-219ENST00000584887 RSBN1Q5VWQ0 802 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-219ENST00000584887 DRAM1Q8N682 238 aa16.26■□□□□ 0.19
TOP3A-219ENST00000584887 HAVCR2Q8TDQ0 301 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms