RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 PPA2Q9H2U2 334 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 DECR2Q9NUI1 292 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 FLVCR2Q9UPI3 526 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 ALG5Q9Y673 324 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 ABCA4P78363 2273 aa11.73□□□□□ -0.53
UBBP4-202ENST00000584755 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
UBBP4-202ENST00000584755 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
UBBP4-202ENST00000584755 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 A0A1W2PPR1 153 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 TMEM82A0PJX8 343 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 LRRC30A6NM36 301 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 PYCARD-AS1I3L0S3 204 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 ARPC1BO15143 372 aaKnown RBP11.72□□□□□ -0.53
UBBP4-202ENST00000584755 PRAF2O60831 178 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 CSN2P05814 226 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 RNF224P0DH78 156 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 OR3A1P47881 315 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 OR3A3P47888 321 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 COL10A1Q03692 680 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 STUMQ69YW2 141 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 ZNF660Q6AZW8 331 aaPredicted RBP11.72□□□□□ -0.53
UBBP4-202ENST00000584755 C20orf204Q6ZNR8 217 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 DTX2Q86UW9 622 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 TERB2Q8NHR7 220 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 SHARPINQ9H0F6 387 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 GHITMQ9H3K2 345 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 CHMP1AQ9HD42 196 aaPredicted RBP11.72□□□□□ -0.53
UBBP4-202ENST00000584755 MYOZ1Q9NP98 299 aaPredicted RBP11.72□□□□□ -0.53
UBBP4-202ENST00000584755 CBLN4Q9NTU7 201 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 EHFQ9NZC4 300 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 MYO18BQ8IUG5 2567 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 DYSFO75923 2080 aa11.72□□□□□ -0.53
UBBP4-202ENST00000584755 KIR2DS1A0A191URI9 304 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 CYB5R3P00387 301 aaPredicted RBP11.71□□□□□ -0.53
UBBP4-202ENST00000584755 IL5P05113 134 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 DANCRP0C864 163 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 IRF2P14316 349 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 MUC1P15941 1255 aaPredicted RBP11.71□□□□□ -0.53
UBBP4-202ENST00000584755 CD80P33681 288 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 KIR2DS4P43632 304 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 RAB25P57735 213 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 ARPC4P59998 168 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 KIR2DS1Q14954 304 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 SCGB2B2Q4G0G5 96 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 MED30Q96HR3 178 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 NEURL2Q9BR09 285 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 ALX4Q9H161 411 aaPredicted RBP11.71□□□□□ -0.53
UBBP4-202ENST00000584755 MBNL3Q9NUK0 354 aaKnown RBP11.71□□□□□ -0.53
UBBP4-202ENST00000584755 NECAP2Q9NVZ3 263 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
UBBP4-202ENST00000584755 HRNRQ86YZ3 2850 aaPredicted RBP11.71□□□□□ -0.54
UBBP4-202ENST00000584755 IGHV3OR15-7A0A075B7D8 119 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 A6NNC1 897 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 PFDN1O60925 122 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 CD8AP01732 235 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 GSTT2P0CG29 244 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TRAPPC2P0DI81 140 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TRAPPC2BP0DI82 140 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 FAM201AQ5SY85 155 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 AADACL3Q5VUY0 350 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 MEX3BQ6ZN04 569 aaKnown RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SLC36A1Q7Z2H8 476 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 BOLLQ8N9W6 283 aaKnown RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 OR5T2Q8NGG2 359 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SDSLQ96GA7 329 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SNX22Q96L94 193 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 DCAF16Q9NXF7 216 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 MGAT4AQ9UM21 535 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 A0A0A6YYJ9 748 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TMEM30CPA0ZSE6 113 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 OOEPA6NGQ2 149 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 LGALS8O00214 317 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SDCBPO00560 298 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 FABP7O15540 132 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 HPXP02790 462 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TFF1P04155 84 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 OR5H8P0DN80 308 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SRSF1Q07955 248 aaKnown RBP eCLIP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 ATXN7L3Q14CW9 347 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 ATPAF1Q5TC12 328 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 PEG10Q86TG7 708 aaKnown RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 COQ2Q96H96 371 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 SPOCK3Q9BQ16 436 aa11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TRAF4Q9BUZ4 470 aaPredicted RBP11.7□□□□□ -0.54
UBBP4-202ENST00000584755 TMEM106BQ9NUM4 274 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms