RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	ROM1	Q03395	351 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PCK2	Q16822	640 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	C1QL2	Q7Z5L3	287 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	DTX1	Q86Y01	620 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TCTEX1D2	Q8WW35	142 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	AQP3	Q92482	292 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ARHGAP5-AS1	Q96IT6	56 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PKIB	Q9C010	78 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		E9PLN8	166 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	IFNL4	K9M1U5	179 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TCN2	P20062	427 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	FABP9	Q0Z7S8	132 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RAB32	Q13637	225 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SMIM21	Q3B7S5	101 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ANKRD55	Q3KP44	614 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SSX7	Q7RTT5	188 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZNF100	Q8IYN0	542 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SMIM12	Q96EX1	92 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PIK3IP1	Q96FE7	263 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	C20orf24	Q9BUV8	137 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	LOXL2	Q9Y4K0	774 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	LIPG	Q9Y5X9	500 aa		10.09	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	SHANK1	Q9Y566	2161 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		A0A1W2PQD3	144 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NTN3	O00634	580 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF20	P17024	532 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	HSF1	Q00613	529 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR2A2	Q6IF42	318 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C1orf87	Q8N0U7	546 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF283	Q8N7M2	679 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	BEND2	Q8NDZ0	799 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	AKR1E2	Q96JD6	320 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	JSRP1	Q96MG2	331 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C5orf66	Q9H5L9	145 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DNAJC4	Q9NNZ3	241 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAB9B	Q9NP90	201 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF581	Q9P0T4	197 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAB22A	Q9UL26	194 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C1orf196	B1AJZ1	125 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DAO	P14920	347 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	HIST1H1B	P16401	226 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MSR1	P21757	451 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZFP36L1	Q07352	338 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RPL7L1	Q6DKI1	246 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAM57B	Q71RH2	274 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	BAP18	Q8IXM2	172 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	WFDC1	Q9HC57	220 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	GPR173	Q9NS66	373 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	B3GAT1	Q9P2W7	334 aa		10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	EML6	Q6ZMW3	1958 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NBEA	Q8NFP9	2946 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		C9JQL5	133 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CDX4	O14627	284 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	LRP3	O75074	770 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FGF5	P12034	268 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TDGF1P3	P51864	188 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM50B	P56557	158 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MYBPH	Q13203	477 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	COX19	Q49B96	90 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PYY3	Q5JQD4	70 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	AVPI1	Q5T686	147 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DCAF12	Q5T6F0	453 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAM180A	Q6UWF9	173 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NFAM1	Q8NET5	270 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ST6GALNAC6	Q969X2	333 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM230	Q96A57	120 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX5	Q96PT3	197 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	WDR54	Q9H977	334 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	GPR84	Q9NQS5	396 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MGA	Q8IWI9	3026 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	IGLV3-12	A0A075B6K2	115 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	IGHV3-15	A0A0B4J1V0	119 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		A0A1B0GW55	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	METTL15P1	P0C7V9	234 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L2	P0CJ85	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L3	P0CJ86	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L4	P0CJ87	422 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L5	P0CJ88	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L6	P0CJ89	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4L7	P0CJ90	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAP1B	P61224	184 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	AES	Q08117	197 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C5orf47	Q569G3	176 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NTNG2	Q96CW9	530 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RAB3C	Q96E17	227 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	NDUFAF3	Q9BU61	184 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SNHG12	Q9BXW3	62 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PIGM	Q9H3S5	423 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PLK3	Q9H4B4	646 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAM206A	Q9NX38	181 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	KLHL13	Q9P2N7	655 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MYOT	Q9UBF9	498 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DUX4	Q9UBX2	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		F5H5K5	113 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms