RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 A0A1W2PQ09 198 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 HAND1O96004 215 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 NDUFB7P17568 137 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 SCN1BQ07699 218 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 AWAT2Q6E213 333 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 GLIPR1L1Q6UWM5 242 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 SSR3Q9UNL2 185 aa12.73□□□□□ -0.37
SKA2-209ENST00000583976 A0A1W2PP11 408 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 TRIM64CA6NLI5 447 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 CSTBP04080 98 aaKnown RBP12.72□□□□□ -0.37
SKA2-209ENST00000583976 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 SERPINA2P20848 420 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 GADD45AP24522 165 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 SLC22A6Q4U2R8 563 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 LYPD6Q86Y78 171 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 CDH26Q8IXH8 852 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 ZNF561Q8N587 486 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 ASCC1Q8N9N2 400 aaKnown RBP12.72□□□□□ -0.37
SKA2-209ENST00000583976 SDSLQ96GA7 329 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 AJUBAQ96IF1 538 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 CHCHD6Q9BRQ6 235 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
SKA2-209ENST00000583976 GLS2Q9UI32 602 aa12.72□□□□□ -0.37
SKA2-209ENST00000583976 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 SHISA3A0PJX4 238 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 M0R1W7 72 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 SIRPB1O00241 398 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 SH2D1BO14796 132 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 CHST1O43916 411 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 CHRM2P08172 466 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 JUNBP17275 347 aaPredicted RBP12.71□□□□□ -0.37
SKA2-209ENST00000583976 MYL9P24844 172 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 MTNR1BP49286 362 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 UBE2E1P51965 193 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 EFNB2P52799 333 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 ZNF146Q15072 292 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 PIGYQ3MUY2 71 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 NCR3LG1Q68D85 454 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 FAM185AQ8N0U4 392 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 BEND2Q8NDZ0 799 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 OR5R1Q8NH85 324 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.37
SKA2-209ENST00000583976 GFI1Q99684 422 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 RNF167Q9H6Y7 350 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 METTL8Q9H825 291 aaKnown RBP12.71□□□□□ -0.37
SKA2-209ENST00000583976 RHOFQ9HBH0 211 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 C19orf12Q9NSK7 152 aa12.71□□□□□ -0.37
SKA2-209ENST00000583976 PLXNB1O43157 2135 aa12.71□□□□□ -0.38
SKA2-209ENST00000583976 GPR37O15354 613 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 TK1P04183 234 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 ZNF44P15621 663 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 GALP22466 123 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 GABRR1P24046 479 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 SPIN3Q5JUX0 258 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 SSX3Q99909 188 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 BANF2Q9H503 90 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
SKA2-209ENST00000583976 KMT2CQ8NEZ4 4911 aaKnown RBP12.69□□□□□ -0.38
SKA2-209ENST00000583976 TMEM82A0PJX8 343 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 SMIM30A4D0T7 59 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 DEGS1O15121 323 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 OR2H2O95918 312 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 HTR2CP28335 458 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
SKA2-209ENST00000583976 BMXP51813 675 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 CAV3P56539 151 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 OR10A3P58181 314 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 C1orf100Q5SVJ3 147 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 SAMD5Q5TGI4 173 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 OR4M1Q8NGD0 313 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 FAM46BQ96A09 425 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 YIPF6Q96EC8 236 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 DMRTB1Q96MA1 342 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 MRPS26Q9BYN8 205 aaKnown RBP12.69□□□□□ -0.38
SKA2-209ENST00000583976 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 ZNF581Q9P0T4 197 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 FBLN5Q9UBX5 448 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 V9GY05 133 aa12.69□□□□□ -0.38
SKA2-209ENST00000583976 TRAV1-2A0A0B4J238 106 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 K7N7A8 449 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 HSPB6O14558 160 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 PDCD5O14737 125 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 PSPNO60542 156 aa12.68□□□□□ -0.38
SKA2-209ENST00000583976 ZNF780AO75290 641 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms