RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SYT6Q5T7P8 510 aaPredicted RBP20.3■□□□□ 0.84
TSEN54-209ENST00000583454 RUSC1-AS1Q66K80 236 aa20.3■□□□□ 0.84
TSEN54-209ENST00000583454 TPRX1Q8N7U7 411 aa20.3■□□□□ 0.84
TSEN54-209ENST00000583454 GFI1Q99684 422 aa20.3■□□□□ 0.84
TSEN54-209ENST00000583454 LINC00312Q9Y6C7 94 aa20.3■□□□□ 0.84
TSEN54-209ENST00000583454 FUOMA2VDF0 154 aa20.29■□□□□ 0.84
TSEN54-209ENST00000583454 GEMIN2O14893 280 aaKnown RBP20.29■□□□□ 0.84
TSEN54-209ENST00000583454 HOXA3O43365 443 aaPredicted RBP20.29■□□□□ 0.84
TSEN54-209ENST00000583454 MDKP21741 143 aaPredicted RBP20.29■□□□□ 0.84
TSEN54-209ENST00000583454 CALRP27797 417 aaKnown RBP20.29■□□□□ 0.84
TSEN54-209ENST00000583454 AESQ08117 197 aa20.29■□□□□ 0.84
TSEN54-209ENST00000583454 NCR3LG1Q68D85 454 aa20.29■□□□□ 0.84
TSEN54-209ENST00000583454 HCP5Q6MZN7 132 aa20.29■□□□□ 0.84
TSEN54-209ENST00000583454 ZNF581Q9P0T4 197 aa20.29■□□□□ 0.84
TSEN54-209ENST00000583454 hCG_1809904A0A1W2PP81 198 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 A0A1W2PPE2 198 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 A0A1W2PR64 198 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 A0A1W2PRV1 198 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 POM121CA8CG34 1229 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 SLC22A1O15245 554 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 TNFAIP8O95379 198 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 RBP4P02753 201 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 UBBP0CG47 229 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 UBE2E1P51965 193 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 PAX5Q02548 391 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 GUCA2AQ02747 115 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 PRB3Q04118 309 aaPredicted RBP20.28■□□□□ 0.84
TSEN54-209ENST00000583454 MPV17LQ2QL34 196 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 PAN3Q58A45 887 aaKnown RBP20.28■□□□□ 0.84
TSEN54-209ENST00000583454 C16orf87Q6PH81 154 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 PDZD9Q8IXQ8 264 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 TMEM104Q8NE00 496 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 COQ2Q96H96 371 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 WNK1Q9H4A3 2382 aa20.28■□□□□ 0.84
TSEN54-209ENST00000583454 TRAV1-2A0A0B4J238 106 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 MEX3AA1L020 520 aaKnown RBP20.27■□□□□ 0.84
TSEN54-209ENST00000583454 OR7C1O76099 320 aaPredicted RBP20.27■□□□□ 0.84
TSEN54-209ENST00000583454 GLIPR1P48060 266 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 KCNJ3P48549 501 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 KLRD1Q13241 179 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 TAF9Q16594 264 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 PIP4P2Q8N4L2 257 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 OR6M1Q8NGM8 313 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 CORO2AQ92828 525 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 ZNF714Q96N38 554 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 NCOR1P1Q9H4R4 102 aa20.27■□□□□ 0.84
TSEN54-209ENST00000583454 UBE2J1Q9Y385 318 aaPredicted RBP20.27■□□□□ 0.84
TSEN54-209ENST00000583454 AK6Q9Y3D8 172 aaKnown RBP20.27■□□□□ 0.84
TSEN54-209ENST00000583454 MGMTP16455 207 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 HTR2CP28335 458 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 ERVFRD-1P60508 538 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 ATXN7L3Q14CW9 347 aaPredicted RBP20.26■□□□□ 0.83
TSEN54-209ENST00000583454 KRBOX4Q5JUW0 171 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 SUMF2Q8NBJ7 301 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 Q96M66 194 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 DPCDQ9BVM2 203 aaPredicted RBP20.26■□□□□ 0.83
TSEN54-209ENST00000583454 BANF2Q9H503 90 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 HEXA-AS1Q9H8Q6 139 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 MMP24Q9Y5R2 645 aa20.26■□□□□ 0.83
TSEN54-209ENST00000583454 A0A087WXM4 84 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 ODAMA1E959 279 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A10PA6NDY2 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A18PA6NE21 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A16PA6NEW6 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A20PA6NIJ5 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A8PA6NJQ4 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A7PA6NKC0 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A22PA8MWA6 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A12PA8MX19 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A5PA8MXJ8 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A23PA8MXZ1 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 CRTAPO75718 401 aaPredicted RBP20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A15PP0C7V4 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A13PP0C7W8 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A14PP0C7W9 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FAM90A24PP0C7X0 464 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 OMGP23515 440 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 FGF9P31371 208 aaPredicted RBP20.25■□□□□ 0.83
TSEN54-209ENST00000583454 PSMD7P51665 324 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 NEDD8Q15843 81 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 Q6YL49 198 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 TSPAN14Q8NG11 270 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 SELENOIQ9C0D9 397 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 CST11Q9H112 138 aa20.25■□□□□ 0.83
TSEN54-209ENST00000583454 PRKDCP78527 4128 aaKnown RBP20.25■□□□□ 0.83
TSEN54-209ENST00000583454 SHISA3A0PJX4 238 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 SLC17A2O00624 439 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 HSPB6O14558 160 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 NPFFO15130 113 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 QRFPP83859 136 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 RELBQ01201 579 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 BARHL1Q9BZE3 327 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 SPACA1Q9HBV2 294 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 TAS2R3Q9NYW6 316 aa20.24■□□□□ 0.83
TSEN54-209ENST00000583454 RCC2Q9P258 522 aaKnown RBP20.24■□□□□ 0.83
TSEN54-209ENST00000583454 TRGV10A0A0A0MS01 117 aa20.23■□□□□ 0.83
TSEN54-209ENST00000583454 FAM181BA6NEQ2 426 aa20.23■□□□□ 0.83
TSEN54-209ENST00000583454 BPNT1O95861 308 aa20.23■□□□□ 0.83
TSEN54-209ENST00000583454 IGHV1-8P0DP01 117 aa20.23■□□□□ 0.83
TSEN54-209ENST00000583454 VSIG8P0DPA2 414 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms