RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 H3BUI4 141 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 GPX5O75715 221 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 TNFAIP8O95379 198 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 CD2P06729 351 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ATF1P18846 271 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 CELP19835 753 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 PRKACBP22694 351 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 MPZP25189 248 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 EDDM3BP56851 147 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ERVK11-1P61568 191 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 COL10A1Q03692 680 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 CD69Q07108 199 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 EGFEM1PQ0D2K5 195 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 MED22Q15528 200 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 UBE2UQ5VVX9 321 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 TCF23Q7RTU1 214 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 SPARTQ8N0X7 666 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 BATF2Q8N1L9 274 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ASCC1Q8N9N2 400 aaKnown RBP10.85□□□□□ -0.67
SS18-222ENST00000582792 OR51A4Q8NGJ6 313 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 OR5D14Q8NGL3 314 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 OR10AC1Q8NH08 325 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
SS18-222ENST00000582792 UFD1Q92890 307 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 SPSB1Q96BD6 273 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ADAT3Q96EY9 351 aaPredicted RBP10.85□□□□□ -0.67
SS18-222ENST00000582792 ZNF714Q96N38 554 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ZCCHC4Q9H5U6 513 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 GPR173Q9NS66 373 aa10.85□□□□□ -0.67
SS18-222ENST00000582792 ZNF737O75373 536 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 CHRM2P08172 466 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 CPEP16870 476 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 PSMA1P25786 263 aaKnown RBP10.84□□□□□ -0.67
SS18-222ENST00000582792 MAP2K4P45985 399 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 RPS11P62280 158 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-222ENST00000582792 MEF2CQ06413 473 aaPredicted RBP10.84□□□□□ -0.67
SS18-222ENST00000582792 DOC2BQ14184 412 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 UBE2V2Q15819 145 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 Q499Y3 187 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 ZNF529Q6P280 563 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 GDPD3Q7L5L3 318 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 C16orf82Q7Z2V1 217 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 NDNFQ8TB73 568 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 TSEN15Q8WW01 171 aaKnown RBP10.84□□□□□ -0.67
SS18-222ENST00000582792 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
SS18-222ENST00000582792 MGLLQ99685 303 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 B9D2Q9BPU9 175 aa10.84□□□□□ -0.67
SS18-222ENST00000582792 TRBV5-7A0A0A0MS05 114 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 IGHV2-26A0A0B4J1V2 119 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 OCM2P0CE71 109 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 MAPK3P27361 379 aaPredicted RBP10.83□□□□□ -0.68
SS18-222ENST00000582792 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
SS18-222ENST00000582792 IL24Q13007 206 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 UNQ9370/PRO34162Q6UXP9 181 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 LHFPL2Q6ZUX7 228 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 OR8H2Q8N162 312 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 ZFP41Q8N8Y5 198 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 OR4X2Q8NGF9 303 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 PHYHIPQ92561 330 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 AKR1E2Q96JD6 320 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 PKIBQ9C010 78 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 LIN7BQ9HAP6 207 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 SESN1Q9Y6P5 492 aa10.83□□□□□ -0.68
SS18-222ENST00000582792 A0A087WXM4 84 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 hADV38S2A0JD32 116 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 A6NIN4 97 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 H3BSH0 61 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 LPLP06858 475 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 FSTP19883 344 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 RBP2P50120 134 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 ATP1B3P54709 279 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 ANGPTL5Q86XS5 388 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 LINC00482Q8N8I6 264 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 TMEM106AQ96A25 262 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 BORCS8Q96FH0 119 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 CPNE2Q96FN4 548 aaPredicted RBP10.82□□□□□ -0.68
SS18-222ENST00000582792 CLEC7AQ9BXN2 247 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 TMEM133Q9H2Q1 129 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 LINC00312Q9Y6C7 94 aa10.82□□□□□ -0.68
SS18-222ENST00000582792 TRIM64CA6NLI5 447 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 SULT1B1O43704 296 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 SC5DO75845 299 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 HSMCR30P0CW71 290 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 IGFBP3P17936 291 aaPredicted RBP10.81□□□□□ -0.68
SS18-222ENST00000582792 RAB3AP20336 220 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 GALP22466 123 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 HTR1DP28221 377 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 EDDM3AQ14507 147 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 ABCA11PQ4W5N1 156 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 LIPKQ5VXJ0 399 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 C10orf99Q6UWK7 81 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 OR4P4Q8NGL7 312 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 CAPSLQ8WWF8 208 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 DPF1Q92782 380 aa10.81□□□□□ -0.68
SS18-222ENST00000582792 SNX22Q96L94 193 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms