RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 IFNA6P05013 189 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SOD3P08294 240 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 FCGR3AP08637 254 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 DTYMKP23919 212 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SERPINF1P36955 418 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 ATP5J2P56134 94 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 BTG1P62324 171 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 RBMS2Q15434 407 aaKnown RBP10.58□□□□□ -0.72
SRSF1-204ENST00000581979 TATDN3Q17R31 274 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SCGB2B2Q4G0G5 96 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SPIN3Q5JUX0 258 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SUMF2Q8NBJ7 301 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 OR5H2Q8NGV7 314 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 NEUROG1Q92886 237 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 GINS4Q9BRT9 223 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 HES4Q9HCC6 221 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 IL19Q9UHD0 177 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 GLS2Q9UI32 602 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
SRSF1-204ENST00000581979 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 SIRPB1O00241 398 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 SH2D1BO14796 132 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 WNT9BO14905 357 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 ARPC1BO15143 372 aaKnown RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 ZNF735P0CB33 412 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 APOBEC3AP31941 199 aaPredicted RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 TAS2R46P59540 309 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 RBM39Q14498 530 aaKnown RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 ZNF146Q15072 292 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 MICBQ29980 383 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 CHRFAM7AQ494W8 412 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 Q6P435 159 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 Q71RC1 249 aaPredicted RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 OR10Z1Q8NGY1 313 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 RDH5Q92781 318 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 DIRC2Q96SL1 478 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 SLC6A7Q99884 636 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 DPCDQ9BVM2 203 aaPredicted RBP10.57□□□□□ -0.72
SRSF1-204ENST00000581979 CHST6Q9GZX3 395 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 C12orf4Q9NQ89 552 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 OR14J1Q9UGF5 321 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 FLVCR2Q9UPI3 526 aa10.57□□□□□ -0.72
SRSF1-204ENST00000581979 A0A0B4J293 547 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 C17orf100A8MU93 164 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 M0R233 179 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 OR2H2O95918 312 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 OR3A3P47888 321 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 ARPC4P59998 168 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 SMIM21Q3B7S5 101 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 SPRNQ5BIV9 151 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 IDO2Q6ZQW0 420 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 BOLLQ8N9W6 283 aaKnown RBP10.56□□□□□ -0.72
SRSF1-204ENST00000581979 PRRT1Q99946 306 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 WDR13Q9H1Z4 485 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 DYNLRB1Q9NP97 96 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 ETAA1Q9NY74 926 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 RASL12Q9NYN1 266 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
SRSF1-204ENST00000581979 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 PLCE1Q9P212 2302 aa10.56□□□□□ -0.72
SRSF1-204ENST00000581979 TRAV24A0A0B4J272 114 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 HAND1O96004 215 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 GLAP06280 429 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 GATA4P43694 442 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 RAG2P55895 527 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 TSPAN5P62079 268 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 ZMYND11Q15326 602 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 AGAP6Q5VW22 663 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 DTX2Q86UW9 622 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 OR5AP2Q8NGF4 316 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 DACT3Q96B18 629 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 ABCA2Q9BZC7 2435 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 ZNF286AQ9HBT8 521 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 SLC33A1O00400 549 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 SMAD7O15105 426 aaKnown RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 PEX14O75381 377 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 KNG1P01042 644 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 CD8AP01732 235 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 MDH2P40926 338 aaKnown RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 CEBPDP49716 269 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 HOXA4Q00056 320 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 CDK10Q15131 360 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 EFNB3Q15768 340 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 OR11L1Q8NGX0 322 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 GIMAP1Q8WWP7 306 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 ERGIC1Q969X5 290 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 DHRS9Q9BPW9 319 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 TRAF4Q9BUZ4 470 aaPredicted RBP10.55□□□□□ -0.72
SRSF1-204ENST00000581979 BEX2Q9BXY8 128 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 PPA2Q9H2U2 334 aa10.55□□□□□ -0.72
SRSF1-204ENST00000581979 BEX1Q9HBH7 125 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms