RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CNTFRP26992 372 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 EVI2BP34910 448 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 PLTPP55058 493 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 PSMC5P62195 406 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 XIAPP98170 497 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 ACSBG2Q5FVE4 666 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 IDNKQ5T6J7 187 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 SYT6Q5T7P8 510 aaPredicted RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 GLYATQ6IB77 296 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 CA13Q8N1Q1 262 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 DEFB119Q8N690 84 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 OR11G2Q8NGC1 345 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 OR6K3Q8NGY3 331 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 OR2AE1Q8NHA4 323 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 SCGB1C1Q8TD33 95 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 BLNKQ8WV28 456 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 RILPQ96NA2 401 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 ANAPC13Q9BS18 74 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 CXCL16Q9H2A7 254 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 MFSD1Q9H3U5 465 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 WDR55Q9H6Y2 383 aaPredicted RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 PLEKHA1Q9HB21 404 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 ANKHQ9HCJ1 492 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 ACOT13Q9NPJ3 140 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 TAS2R9Q9NYW1 312 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 VPREB3Q9UKI3 123 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 C14orf166Q9Y224 244 aaKnown RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 CFL2Q9Y281 166 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 BTRCQ9Y297 605 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 AMMECR1Q9Y4X0 333 aaPredicted RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 URGCP-MRPS24S4R325 110 aa0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 HELZ2Q9BYK8 2649 aaKnown RBP0.76□□□□□ -2.29
SMCHD1-206ENST00000581631 COL4A1P02462 1669 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 NOS1P29475 1434 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 OR5H14A6NHG9 310 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 CD300LBA8K4G0 201 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 ODF3BA8MYP8 253 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 FAM25EA8MYX2 175 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 M0QXV9 152 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 RFXANKO14593 260 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 LECT2O14960 151 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 TCAPO15273 167 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 OTCP00480 354 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 CPN2P22792 545 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 GPR4P46093 362 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 TAS2R60P59551 318 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 KRTAP10-4P60372 401 aaPredicted RBP0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 TMED1Q13445 227 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 NKAIN1Q4KMZ8 207 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 ACTL10Q5JWF8 245 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 CLEC12AQ5QGZ9 265 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 FAM19A3Q7Z5A8 133 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 C2orf73Q8N5S3 287 aaPredicted RBP0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 OR4A5Q8NH83 315 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 TWIST2Q8WVJ9 160 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 DDIT4LQ96D03 193 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 DNAJC30Q96LL9 226 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 LZTFL1Q9NQ48 299 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 SLC23A2Q9UGH3 650 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 AP3M1Q9Y2T2 418 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 OR51B4Q9Y5P0 310 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 YLPM1P49750 1951 aaKnown RBP0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 KMT2BQ9UMN6 2715 aaPredicted RBP0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 COL4A2P08572 1712 aa0.75□□□□□ -2.29
SMCHD1-206ENST00000581631 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 CRB1P82279 1406 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 TNIKQ9UKE5 1360 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 A0A1W2PQL4 384 aaPredicted RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GSTTP1A0A1W2PQM5 241 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 E7EWF7 191 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 UPK2O00526 184 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 EEF1E1O43324 174 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GATCO43716 136 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 MYO1DO94832 1006 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 SNAI1O95863 264 aaPredicted RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GUSBP08236 651 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 STAG3L2P0CL84 134 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GZMBP10144 247 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 PSKH1P11801 424 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 IL12BP29460 328 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 SS18Q15532 418 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 VAMP3Q15836 100 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 CAVIN4Q5BKX8 364 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 C10orf91Q5T1B1 145 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 NXNL2Q5VZ03 156 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 UGT2A3Q6UWM9 527 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 RBM45Q8IUH3 476 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 ZIC4Q8N9L1 334 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 ASCC1Q8N9N2 400 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GATD1Q8NB37 220 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 OR4C16Q8NGL9 310 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 MITD1Q8WV92 249 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 FAM131CQ96AQ9 280 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 LRRC39Q96DD0 335 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 REEP6Q96HR9 211 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 ARL6Q9H0F7 186 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 GAL3ST2Q9H3Q3 398 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 FBXL15Q9H469 300 aa0.74□□□□□ -2.29
SMCHD1-206ENST00000581631 PRORYQ9H606 182 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms