RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAF4-214ENST00000580073 OR14J1Q9UGF5 321 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 SLC7A11Q9UPY5 501 aa10.8□□□□□ -0.68
TRAF4-214ENST00000580073 C17orf98A8MV24 154 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 ODF3BA8MYP8 253 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 CHRM2P08172 466 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF728P0DKX0 622 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 PF4V1P10720 104 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 PRKACBP22694 351 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 NPBWR2P48146 333 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 MTCP1P56278 107 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 EDDM3BP56851 147 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 FABP5Q01469 135 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 MEF2CQ06413 473 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-214ENST00000580073 IL24Q13007 206 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF273Q14593 569 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 SLC25A26Q70HW3 274 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 Q8IYB0 196 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 OR11H6Q8NGC7 330 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 OR5D18Q8NGL1 313 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 UFD1Q92890 307 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 SLAMF9Q96A28 289 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 PHF21AQ96BD5 680 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 SPSB1Q96BD6 273 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 BORCS8Q96FH0 119 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 ZNF714Q96N38 554 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 HES4Q9HCC6 221 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 SERTAD4Q9NUC0 356 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 AURKAIP1Q9NWT8 199 aaPredicted RBP10.79□□□□□ -0.68
TRAF4-214ENST00000580073 IL36RNQ9UBH0 155 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
TRAF4-214ENST00000580073 hADV38S2A0JD32 116 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 A6NDX4 124 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 TRIM64CA6NLI5 447 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 K7N7A8 449 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
TRAF4-214ENST00000580073 PF4P02776 101 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 SMIM18P0DKX4 95 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 IGHV1-8P0DP01 117 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 CALCBP10092 127 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 CD28P10747 220 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 FSTP19883 344 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 RAB3AP20336 220 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 RBP2P50120 134 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 ATP1B3P54709 279 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 PDZK1IP1Q13113 114 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 DYNC1I2Q13409 638 aaKnown RBP10.78□□□□□ -0.68
TRAF4-214ENST00000580073 KISS1Q15726 138 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 SSX2Q16385 188 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 PLA1AQ53H76 456 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 LHFPL2Q6ZUX7 228 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 CEACAM19Q7Z692 300 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 LRRTM1Q86UE6 522 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 OR8H2Q8N162 312 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 SVOPQ8N4V2 548 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 GFI1Q99684 422 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 GPR61Q9BZJ8 451 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 MMP28Q9H239 520 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 GLS2Q9UI32 602 aa10.78□□□□□ -0.68
TRAF4-214ENST00000580073 SHISA3A0PJX4 238 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 GABRPO00591 440 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-214ENST00000580073 CD2P06729 351 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 UCHL1P09936 223 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 BCL3P20749 454 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 PSMB9P28065 219 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 POU3F4P49335 361 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 CEBPDP49716 269 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-214ENST00000580073 DCTN2Q13561 401 aaKnown RBP10.77□□□□□ -0.69
TRAF4-214ENST00000580073 NEDD8Q15843 81 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 SYT6Q5T7P8 510 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-214ENST00000580073 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 LHFPL4Q7Z7J7 247 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 TMEM219Q86XT9 240 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 LYG1Q8N1E2 194 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 C11orf42Q8N5U0 333 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 MS4A15Q8N5U1 240 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 OR4X2Q8NGF9 303 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 NDNFQ8TB73 568 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 PIFOQ8TCI5 191 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 MUL1Q969V5 352 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 CEP19Q96LK0 163 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-214ENST00000580073 WNT10AQ9GZT5 417 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 NDUFB11Q9NX14 153 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 SESN1Q9Y6P5 492 aa10.77□□□□□ -0.69
TRAF4-214ENST00000580073 NOTCH3Q9UM47 2321 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 TNFAIP8O95379 198 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 CYB5AP00167 134 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 MAS1P04201 325 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 HCKP08631 526 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 BDKRB2P30411 391 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 OR3A4PP47883 348 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 COL10A1Q03692 680 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 HABP2Q14520 560 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-214ENST00000580073 CD200R1LQ6Q8B3 271 aa10.76□□□□□ -0.69
TRAF4-214ENST00000580073 SATL1Q86VE3 508 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms