RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ZNF497Q6ZNH5 498 aa15.57■□□□□ 0.08
PRKCA-203ENST00000578063 Q6ZPA2 131 aa15.57■□□□□ 0.08
PRKCA-203ENST00000578063 CD177Q8N6Q3 437 aa15.57■□□□□ 0.08
PRKCA-203ENST00000578063 NECAP2Q9NVZ3 263 aa15.57■□□□□ 0.08
PRKCA-203ENST00000578063 RALYQ9UKM9 306 aaKnown RBP15.57■□□□□ 0.08
PRKCA-203ENST00000578063 CHD3Q12873 2000 aaKnown RBP15.56■□□□□ 0.08
PRKCA-203ENST00000578063 ROS1P08922 2347 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 FLNCQ14315 2725 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 ICE1Q9Y2F5 2266 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 A0A0B4J293 547 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 RNF224P0DH78 156 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 MUC1P15941 1255 aaPredicted RBP15.56■□□□□ 0.08
PRKCA-203ENST00000578063 TSPAN5P62079 268 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 ATXN7L3Q14CW9 347 aaPredicted RBP15.56■□□□□ 0.08
PRKCA-203ENST00000578063 TEX36Q5VZQ5 186 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 ZNF880Q6PDB4 577 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 OR5T2Q8NGG2 359 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 OR13C8Q8NGS7 320 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 PPP1R35Q8TAP8 253 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 PLPPR1Q8TBJ4 325 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 ZNF222Q9UK12 451 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 MGAT4AQ9UM21 535 aa15.56■□□□□ 0.08
PRKCA-203ENST00000578063 IGHV3OR15-7A0A075B7D8 119 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 OOEPA6NGQ2 149 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 DTX2Q86UW9 622 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 ASCC1Q8N9N2 400 aaKnown RBP15.55■□□□□ 0.08
PRKCA-203ENST00000578063 ANGPTL6Q8NI99 470 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 VRK1Q99986 396 aaPredicted RBP15.55■□□□□ 0.08
PRKCA-203ENST00000578063 TMEM106BQ9NUM4 274 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 FLVCR2Q9UPI3 526 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 CHD6Q8TD26 2715 aa15.55■□□□□ 0.08
PRKCA-203ENST00000578063 TMEM82A0PJX8 343 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 TMEM30CPA0ZSE6 113 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 TMEM178BH3BS89 294 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 PRAF2O60831 178 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 PFDN1O60925 122 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 DANCRP0C864 163 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 RBMXP38159 391 aaKnown RBP15.54■□□□□ 0.08
PRKCA-203ENST00000578063 GABRA2P47869 451 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 OR3A1P47881 315 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 MECP2P51608 486 aaKnown RBP15.54■□□□□ 0.08
PRKCA-203ENST00000578063 PAX5Q02548 391 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 STUMQ69YW2 141 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 C11orf71Q6IPW1 123 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 C17orf107Q6ZR85 190 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 SPOCK3Q9BQ16 436 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 METRNQ9UJH8 293 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 ALG5Q9Y673 324 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 UBR5O95071 2799 aaPredicted RBP15.54■□□□□ 0.08
PRKCA-203ENST00000578063 DOPEY1Q5JWR5 2465 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 IGHV1-69-2A0A0G2JMI3 117 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 TRDCB7Z8K6 153 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 LGALS8O00214 317 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 SDCBPO00560 298 aaPredicted RBP15.54■□□□□ 0.08
PRKCA-203ENST00000578063 ZNF737O75373 536 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 HPXP02790 462 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 FAM201AQ5SY85 155 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 SLC35E4Q6ICL7 350 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 ZDHHC22Q8N966 263 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 TERB2Q8NHR7 220 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 GIMAP1Q8WWP7 306 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 CCL17Q92583 94 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 SNX22Q96L94 193 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 RAB1BQ9H0U4 201 aa15.54■□□□□ 0.08
PRKCA-203ENST00000578063 PKDREJQ9NTG1 2253 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 TRAV38-1A0A0B4J264 116 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 A0A1W2PPR1 153 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 C7orf66A4D0T2 115 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 FABP7O15540 132 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 RLN1P04808 185 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 SOD3P08294 240 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 OR5H8P0DN80 308 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 HLA-DRB3P79483 266 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 C20orf204Q6ZNR8 217 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 LHFPL1Q86WI0 220 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 TGIF2LYQ8IUE0 185 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 ZNF561Q8N587 486 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 OR6F1Q8NGZ6 308 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 SDSLQ96GA7 329 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 TRAF4Q9BUZ4 470 aaPredicted RBP15.53■□□□□ 0.08
PRKCA-203ENST00000578063 DCAF16Q9NXF7 216 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 TRAPPC2LQ9UL33 140 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 CACNA1DQ01668 2161 aa15.53■□□□□ 0.08
PRKCA-203ENST00000578063 PPIAL4EA0A075B759 164 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 PPIAL4DF5H284 164 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 CD8AP01732 235 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 TFF1P04155 84 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 CTXN2P0C2S0 81 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 GSTT2P0CG29 244 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 PPIAL4FP0DN26 164 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 GLP1RP43220 463 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 CHAC2Q8WUX2 184 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 SCGB3A2Q96PL1 93 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 SHARPINQ9H0F6 387 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 MBNL3Q9NUK0 354 aaKnown RBP15.52■□□□□ 0.08
PRKCA-203ENST00000578063 ING3Q9NXR8 418 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 PPIAL4AQ9Y536 164 aa15.52■□□□□ 0.08
PRKCA-203ENST00000578063 FAM208BQ5VWN6 2430 aa15.52■□□□□ 0.07
PRKCA-203ENST00000578063 CEACAM18A8MTB9 384 aa15.51■□□□□ 0.07
PRKCA-203ENST00000578063 MGST3O14880 152 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms