RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 DMRTC1Q5HYR2 192 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OTPQ5XKR4 325 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 AMMECR1LQ6DCA0 310 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RPL7L1Q6DKI1 246 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 ABHD12Q8N2K0 398 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 C11orf44Q8N8P7 122 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 LINC01356Q8N9X3 169 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR10R2Q8NGX6 335 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZNRF4Q8WWF5 429 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 Q96MF0 132 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 BCL7BQ9BQE9 202 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 PLEKHA2Q9HB19 425 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RHOFQ9HBH0 211 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 SLC6A13Q9NSD5 602 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 METTL1Q9UBP6 276 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 STARD10Q9Y365 291 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TCF20Q9UGU0 1960 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 SCN3AQ9NY46 2000 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 LRRC37A2A6NM11 1700 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ARRDC5A6NEK1 342 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RNF223E7ERA6 249 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TIAF1O95411 115 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CYB5R3P00387 301 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 MMP7P09237 267 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 CTLA4P16410 223 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ORM2P19652 201 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RAB5AP20339 215 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 CA5AP35218 305 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 REG1BP48304 166 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ELLP55199 621 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 MS4A2Q01362 244 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 COL10A1Q03692 680 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MRM1Q6IN84 353 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR2W3Q7Z3T1 314 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 TMEM179BQ7Z7N9 219 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 GLRX5Q86SX6 157 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ZFP82Q8N141 532 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 SUMF2Q8NBJ7 301 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR10A7Q8NGE5 316 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 OR10J6PQ8NGY7 276 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RTN4IP1Q8WWV3 396 aaPredicted RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 EEF1AKMT3Q96AZ1 226 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 WBP1Q96G27 269 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 MS4A10Q96PG2 267 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RNF2Q99496 336 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RASL12Q9NYN1 266 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 RBMX2Q9Y388 322 aaKnown RBP2.55□□□□□ -2
SMCHD1-203ENST00000577880 WASHC3Q9Y3C0 194 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 ROS1P08922 2347 aa2.55□□□□□ -2
SMCHD1-203ENST00000577880 M0QYG6 137 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 CORTO00230 105 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 FBXO24O75426 580 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR2J3O76001 311 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 COX5BP10606 129 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 IAPPP10997 89 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 SLC25A6P12236 298 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 NQO2P16083 231 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 HIST1H1BP16401 226 aaKnown RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 PPOXP50336 477 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 HCCSP53701 268 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 RELQ04864 619 aaPredicted RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 ETV3LQ6ZN32 361 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 Q6ZS92 163 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 ATG4DQ86TL0 474 aaPredicted RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 SKA3Q8IX90 412 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 ZIC4Q8N9L1 334 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR2T35Q8NGX2 323 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 SCARB1Q8WTV0 552 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 C16orf92Q96LL3 132 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 MCRIP2Q9BUT9 160 aaKnown RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 WDR13Q9H1Z4 485 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 TUBB1Q9H4B7 451 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 ZMAT4Q9H898 229 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 TAF9BQ9HBM6 251 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 ASCL3Q9NQ33 180 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 BOLA1Q9Y3E2 137 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 PUS1Q9Y606 427 aaKnown RBP eCLIP2.54□□□□□ -2
SMCHD1-203ENST00000577880 PLXNB2O15031 1838 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 NOTCH3Q9UM47 2321 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 CROCCQ5TZA2 2017 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 HELTA6NFD8 242 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR2T8A6NH00 312 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 SEC14L6B5MCN3 397 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 J3KRW8 73 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 BMPR1BO00238 502 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 UBE2L6O14933 153 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 SYNGR1O43759 233 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR2F2O95006 317 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 THY1P04216 161 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 MYOD1P15172 320 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 CHATP28329 748 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 HNRNPFP52597 415 aaKnown RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 HLXQ14774 488 aaPredicted RBP2.54□□□□□ -2
SMCHD1-203ENST00000577880 COLCA1Q6ZS62 124 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 LINC00596Q86U02 117 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 HSD17B11Q8NBQ5 300 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 ZNF439Q8NDP4 499 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR52I1Q8NGK6 324 aa2.54□□□□□ -2
SMCHD1-203ENST00000577880 OR5M8Q8NGP6 311 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms