RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ARAP3Q8WWN8 1544 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 NACADO15069 1562 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 BRD4O60885 1362 aaPredicted RBP0.82□□□□□ -2.28
TOP2A-202ENST00000577541 RAB3GAP2Q9H2M9 1393 aa0.82□□□□□ -2.28
TOP2A-202ENST00000577541 SSH2Q76I76 1423 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 ADAMTSL1Q8N6G6 1762 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 IGLV10-54A0A075B6I4 117 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 IGHV2-26A0A0B4J1V2 119 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 PGPA6NDG6 321 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 A6NED7 52 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 SDHAF1A6NFY7 115 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 FAM25EA8MYX2 175 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GGTLC3B5MD39 225 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 F5H5P2 479 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 J3QKU1 62 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GPR171O14626 319 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 LECT2O14960 151 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 MPZL2O60487 215 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 LDOC1O95751 146 aaPredicted RBP0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GTF2F2P13984 249 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 SPNP16150 400 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 PRPS1L1P21108 318 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 HLA-DMAP28067 261 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GTF2H1P32780 548 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 DNASE1L1P49184 302 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 PSMD7P51665 324 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 HBG1P69891 147 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 HBG2P69892 147 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 DEFA6Q01524 100 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TNFRSF9Q07011 255 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 RAB31Q13636 194 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 STK38Q15208 465 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TRIP13Q15645 432 aaPredicted RBP0.81□□□□□ -2.28
TOP2A-202ENST00000577541 DEFB134Q4QY38 66 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 UBE2NLQ5JXB2 153 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 MRPL2Q5T653 305 aaKnown RBP0.81□□□□□ -2.28
TOP2A-202ENST00000577541 NXNL2Q5VZ03 156 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TMEM215Q68D42 235 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 HBMQ6B0K9 141 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 FAM183BPQ6ZVS7 135 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 USP50Q70EL3 339 aaPredicted RBP0.81□□□□□ -2.28
TOP2A-202ENST00000577541 MSRB3Q8IXL7 192 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 YIPF7Q8N8F6 280 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 OR4K17Q8NGC6 315 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 LMX1AQ8TE12 382 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TMEM239Q8WW34 195 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 NELFBQ8WX92 580 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 OTUB2Q96DC9 234 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 REEP6Q96HR9 211 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 FAM210AQ96ND0 272 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 OR2M4Q96R27 311 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 PRSS27Q9BQR3 290 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 SUCNR1Q9BXA5 334 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GABARAPL1Q9H0R8 117 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 ALX4Q9H161 411 aaPredicted RBP0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TXNIPQ9H3M7 391 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 GOLPH3Q9H4A6 298 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 VCX3AQ9NNX9 186 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 SDHAF3Q9NRP4 125 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 HMGXB4Q9UGU5 601 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 NAGKQ9UJ70 344 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 SLC22A14Q9Y267 594 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 LINC00588Q9Y4M8 146 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 NLRC5Q86WI3 1866 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 ABCB11O95342 1321 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 NRCAMQ92823 1304 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 TMEM94Q12767 1356 aa0.81□□□□□ -2.28
TOP2A-202ENST00000577541 COL18A1P39060 1754 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 IGHV3-21A0A0B4J1V1 117 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 A0A1W2PNM2 257 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 FAM183AA6NL82 134 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 ZNF879B4DU55 563 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 RNASEK-C17orf49H0YIS7 233 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 MKRN2OSH3BPM6 223 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 TCF21O43680 179 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 ASS1P00966 412 aaKnown RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 IGLV6-57P01721 117 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CECR9P0C854 216 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CD99P14209 185 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 SYT1P21579 422 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 FUSP35637 526 aaKnown RBP eCLIP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CCL23P55773 120 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CLDN12P56749 244 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 KRTAP12-1P59990 96 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 RHOAP61586 193 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 BNIP2Q12982 314 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 PMS2P3Q13401 168 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 BSXQ3C1V8 233 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 KRTAP21-3Q3LHN1 58 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 PYDC2Q56P42 97 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 IDNKQ5T6J7 187 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 AMMECR1LQ6DCA0 310 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 THOC7Q6I9Y2 204 aaKnown RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 TRMT10CQ7L0Y3 403 aaKnown RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 CYP4Z1Q86W10 505 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 BLIDQ8IZY5 108 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 RIBC1Q8N443 379 aaPredicted RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 C2orf73Q8N5S3 287 aaPredicted RBP0.8□□□□□ -2.28
TOP2A-202ENST00000577541 TRIML2Q8N7C3 387 aa0.8□□□□□ -2.28
TOP2A-202ENST00000577541 SPERTQ8NA61 448 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms