RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 NKX3-1Q99801 234 aaPredicted RBP11.34□□□□□ -0.59
GGA3-203ENST00000577435 BARHL1Q9BZE3 327 aa11.34□□□□□ -0.59
GGA3-203ENST00000577435 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
GGA3-203ENST00000577435 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
GGA3-203ENST00000577435 VPREB3Q9UKI3 123 aa11.34□□□□□ -0.59
GGA3-203ENST00000577435 ST3GAL6Q9Y274 331 aa11.34□□□□□ -0.59
GGA3-203ENST00000577435 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 CLPXO76031 633 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 MAS1P04201 325 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 GTF2F2P13984 249 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 RELBQ01201 579 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 PAN3Q58A45 887 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 PHYHIPQ92561 330 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 MRPS24Q96EL2 167 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 CNBD2Q96M20 576 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 SSX3Q99909 188 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 LINC00574Q9H8X3 128 aa11.33□□□□□ -0.6
GGA3-203ENST00000577435 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
GGA3-203ENST00000577435 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 ZNF729A6NN14 1252 aaPredicted RBP11.32□□□□□ -0.6
GGA3-203ENST00000577435 HAX1O00165 279 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 MMP23AO75900 390 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 ARG1P05089 322 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 MLLT11Q13015 90 aaPredicted RBP11.32□□□□□ -0.6
GGA3-203ENST00000577435 LRRC75BQ2VPJ9 315 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 MINOS1Q5TGZ0 78 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 RSBN1Q5VWQ0 802 aaPredicted RBP11.32□□□□□ -0.6
GGA3-203ENST00000577435 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 LHFPL4Q7Z7J7 247 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 RTN4RL2Q86UN3 420 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 JAGN1Q8N5M9 183 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 ZNF565Q8N9K5 539 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 SUMF2Q8NBJ7 301 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 TAF15Q92804 592 aaKnown RBP eCLIP11.32□□□□□ -0.6
GGA3-203ENST00000577435 UFD1Q92890 307 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 MUL1Q969V5 352 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
GGA3-203ENST00000577435 SLITRK2Q9H156 845 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 BEX1Q9HBH7 125 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 GHRLQ9UBU3 117 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 BLOC1S6Q9UL45 172 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 MINOS1-NBL1R4GNA1 71 aa11.32□□□□□ -0.6
GGA3-203ENST00000577435 A0A087X0M5 115 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 A0A1B0GX30 115 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 GEMIN2O14893 280 aaKnown RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 DENRO43583 198 aaKnown RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 TSPAN9O75954 239 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 UCHL1P09936 223 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 CPEP16870 476 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 SRMP19623 302 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 SERPINA2P20848 420 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 MDKP21741 143 aaPredicted RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 OMGP23515 440 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 CDK2P24941 298 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 CD34P28906 385 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 RAG2P55895 527 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 INSL4Q14641 139 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 TRAM1Q15629 374 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 C17orf58Q2M2W7 97 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 LIPKQ5VXJ0 399 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 SLC35E4Q6ICL7 350 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 CEACAM19Q7Z692 300 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 LRRTM1Q86UE6 522 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 ABHD12Q8N2K0 398 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 DPCDQ9BVM2 203 aaPredicted RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 PPIL3Q9H2H8 161 aaKnown RBP11.31□□□□□ -0.6
GGA3-203ENST00000577435 C16orf95Q9H693 158 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 TCF7L1Q9HCS4 588 aa11.31□□□□□ -0.6
GGA3-203ENST00000577435 NBEAL1Q6ZS30 2694 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 MEIKINA0A087WXM9 373 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 A0A1W2PP11 408 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A10PA6NDY2 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A18PA6NE21 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A16PA6NEW6 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A20PA6NIJ5 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A7PA6NKC0 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A22PA8MWA6 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A12PA8MX19 464 aa11.3□□□□□ -0.6
GGA3-203ENST00000577435 FAM90A5PA8MXJ8 464 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms