RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 HERPUD1Q15011 391 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF529Q6P280 563 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 CRIP3Q6Q6R5 217 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 KLHDC1Q8N7A1 406 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 GGHQ92820 318 aa12.52□□□□□ -0.41
SF3B3-215ENST00000577085 PPIL3Q9H2H8 161 aaKnown RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 CNOT2Q9NZN8 540 aaKnown RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 SIRT4Q9Y6E7 314 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-215ENST00000577085 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 A6NDX4 124 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OR7C1O76099 320 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-215ENST00000577085 GNAO1P09471 354 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 CSF1P09603 554 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 SERPINA2P20848 420 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 EFNB2P52799 333 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 BDH1Q02338 343 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 Q499Y3 187 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-215ENST00000577085 DMKNQ6E0U4 476 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-215ENST00000577085 AHSA2Q719I0 299 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OSR2Q8N2R0 312 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 ZFP41Q8N8Y5 198 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 BPIFB6Q8NFQ5 453 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OR4P4Q8NGL7 312 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 OR13C5Q8NGS8 318 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 COQ2Q96H96 371 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-215ENST00000577085 PRSS22Q9GZN4 317 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 DPM3Q9P2X0 92 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 ST3GAL6Q9Y274 331 aa12.51□□□□□ -0.41
SF3B3-215ENST00000577085 KBTBD11-OT1A0A1B0GTJ5 212 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 ANKRD65E5RJM6 399 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 XPNPEP2O43895 674 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 LALBAP00709 142 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 KCNJ3P48549 501 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 LDLRAD2Q5SZI1 272 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 JAGN1Q8N5M9 183 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 FAM110DQ8TAY7 271 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-215ENST00000577085 NEK7Q8TDX7 302 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 KIF25Q9UIL4 384 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 ERGIC3Q9Y282 383 aa12.5□□□□□ -0.41
SF3B3-215ENST00000577085 TRAV24A0A0B4J272 114 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 CASQ2O14958 399 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-215ENST00000577085 GTF2F2P13984 249 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 MNDAP41218 407 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 WNT4P56705 351 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 RBM11P57052 281 aaKnown RBP12.49□□□□□ -0.41
SF3B3-215ENST00000577085 GPR176Q14439 515 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 SLC22A6Q4U2R8 563 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 ATAD3CQ5T2N8 411 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 CCBE1Q6UXH8 406 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-215ENST00000577085 BAIAP2L2Q6UXY1 529 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 LINC00596Q86U02 117 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 THRSPQ92748 146 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 ORAI1Q96D31 301 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 OR14A2Q96R54 314 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 DPCDQ9BVM2 203 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-215ENST00000577085 DCLRE1BQ9H816 532 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF286AQ9HBT8 521 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 IL36GQ9NZH8 169 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 PSORS1C1Q9UIG5 152 aa12.49□□□□□ -0.41
SF3B3-215ENST00000577085 AMMECR1Q9Y4X0 333 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-215ENST00000577085 TRBV5-5A0A0J9YX44 114 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 A0A1W2PPK0 400 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 BUB1B-PAK6H3BSN5 160 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 TSPAN15O95858 294 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 JUNBP17275 347 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-215ENST00000577085 CELP19835 753 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-215ENST00000577085 HABP2Q14520 560 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-215ENST00000577085 LTC4SQ16873 150 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 HLA-DRB5Q30154 266 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 ASCL4Q6XD76 172 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 SUMF2Q8NBJ7 301 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 OR9G1Q8NH87 305 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 NCOR1P1Q9H4R4 102 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 DSCAML1Q8TD84 2053 aa12.48□□□□□ -0.41
SF3B3-215ENST00000577085 TRRAPQ9Y4A5 3859 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 TMEM30CPA0ZSE6 113 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 MEGF11A6BM72 1044 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 GEMIN2O14893 280 aaKnown RBP12.47□□□□□ -0.41
SF3B3-215ENST00000577085 IL1AP01583 271 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 IGLV1-47P01700 117 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 MAS1P04201 325 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 FSTP19883 344 aa12.47□□□□□ -0.41
SF3B3-215ENST00000577085 CD34P28906 385 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms