RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 EDDM3BP56851 147 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 SCAND1P57086 179 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 AESQ08117 197 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 ATXN7L3Q14CW9 347 aaPredicted RBP7.07□□□□□ -1.28
NUP88-211ENST00000575976 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 MOGAT2Q3SYC2 334 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 TMEM200BQ69YZ2 307 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 RAB12Q6IQ22 244 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 CLEC9AQ6UXN8 241 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 FAM185AQ8N0U4 392 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 C8orf46Q8TAG6 207 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 PLPPR1Q8TBJ4 325 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 DYNC2LI1Q8TCX1 351 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 PTX4Q96A99 478 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 COQ2Q96H96 371 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 MRI1Q9BV20 369 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 ATG5Q9H1Y0 275 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 SPACA1Q9HBV2 294 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 RSL24D1Q9UHA3 163 aaKnown RBP7.07□□□□□ -1.28
NUP88-211ENST00000575976 KCNS2Q9ULS6 477 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 SPATA2Q9UM82 520 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 ETV7Q9Y603 341 aa7.07□□□□□ -1.28
NUP88-211ENST00000575976 ARHGAP32A7KAX9 2087 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 TRBV23-1A0A0A0MS06 115 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 SMIM31A0A1B0GVY4 71 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 MEX3AA1L020 520 aaKnown RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 UBE2QL1A1L167 161 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 RAB27BO00194 218 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 PDCD6O75340 191 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 CSN2P05814 226 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 LIPFP07098 398 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 ZNF182P17025 639 aaPredicted RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 KCNJ3P48549 501 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 P2RX3P56373 397 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 ARF6P62330 175 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 RPL31P62899 125 aaKnown RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 PAX8Q06710 450 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 RBM39Q14498 530 aaKnown RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 ZNF273Q14593 569 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 KRBOX4Q5JUW0 171 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 DCAF12L2Q5VW00 463 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 RSBN1Q5VWQ0 802 aaPredicted RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 FAHD2BQ6P2I3 314 aaPredicted RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 BTNL3Q6UXE8 466 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 Q71RC1 249 aaPredicted RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 C6orf201Q7Z4U5 140 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 OR56B1Q8NGI3 324 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 NEK7Q8TDX7 302 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 DYRK2Q92630 601 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 KCTD12Q96CX2 325 aaKnown RBP7.06□□□□□ -1.28
NUP88-211ENST00000575976 SLC25A38Q96DW6 304 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 FAHD2AQ96GK7 314 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 NEDD4LQ96PU5 975 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 SULT4A1Q9BR01 284 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 FAAP24Q9BTP7 215 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 RHBDL2Q9NX52 303 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 COMMD3Q9UBI1 195 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 MALRD1Q5VYJ5 2156 aa7.06□□□□□ -1.28
NUP88-211ENST00000575976 TRAV39A0A0B4J263 110 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 A0A0G2JMP0 313 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 A0A0X1KG70 313 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 A0A1W2PQ09 198 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 hADV38S2A0JD32 116 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 ODAMA1E959 279 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 FUOMA2VDF0 154 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 METTL21EPA6NDL7 271 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 A8MV72 311 aaPredicted RBP7.05□□□□□ -1.28
NUP88-211ENST00000575976 H3BUI4 141 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 ZNF701M0R085 212 aaPredicted RBP7.05□□□□□ -1.28
NUP88-211ENST00000575976 AVPP01185 164 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 MT-ND4P03905 459 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 GLAP06280 429 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 CCL3L1P16619 93 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 GATA3P23771 443 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 SOX6P35712 828 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 MEF2CQ06413 473 aaPredicted RBP7.05□□□□□ -1.28
NUP88-211ENST00000575976 DYNC1I2Q13409 638 aaKnown RBP7.05□□□□□ -1.28
NUP88-211ENST00000575976 FAM189A2Q15884 450 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 CR1LQ2VPA4 569 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 PLAC9Q5JTB6 97 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 FOXB2Q5VYV0 432 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 SLC35E4Q6ICL7 350 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 Q6ZTK2 550 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 CMTM4Q8IZR5 234 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 OR4M2Q8NGB6 313 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 OR10R2Q8NGX6 335 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 ACOT12Q8WYK0 555 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 DGCR14Q96DF8 476 aaKnown RBP7.05□□□□□ -1.28
NUP88-211ENST00000575976 ARHGAP5-AS1Q96IT6 56 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 PECRQ9BY49 303 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 C7orf69Q9H7B7 122 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 PLEKHJ1Q9NW61 149 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 ETAA1Q9NY74 926 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 NDUFA13Q9P0J0 144 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 ONECUT1Q9UBC0 465 aa7.05□□□□□ -1.28
NUP88-211ENST00000575976 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms