RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SPIN3Q5JUX0 258 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 HES5Q5TA89 166 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF529Q6P280 563 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 BRICD5Q6PL45 260 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 GDPD3Q7L5L3 318 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 CDH26Q8IXH8 852 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 SAXO1Q8IYX7 474 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 OR52N4Q8NGI2 321 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 MCFD2Q8NI22 146 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 ZFAND2BQ8WV99 257 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 TNFAIP8L1Q8WVP5 186 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 CHST6Q9GZX3 395 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 HMG20AQ9NP66 347 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 GLS2Q9UI32 602 aa10.88□□□□□ -0.67
RPAIN-216ENST00000575599 COL6A5A8TX70 2615 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 IFITM5A6NNB3 132 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 RNASEK-C17orf49H0YIS7 233 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 SIRPB1O00241 398 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 TMEM127O75204 238 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 CCL3L1P16619 93 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF273Q14593 569 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF146Q15072 292 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 GRK1Q15835 563 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 OR8H2Q8N162 312 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 ZSCAN4Q8NAM6 433 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-216ENST00000575599 OR6M1Q8NGM8 313 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 FAM216AQ8WUB2 273 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 ACOT12Q8WYK0 555 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 SNX22Q96L94 193 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 C1orf147Q96MC9 270 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-216ENST00000575599 UQCC2Q9BRT2 126 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
RPAIN-216ENST00000575599 METTL8Q9H825 291 aaKnown RBP10.87□□□□□ -0.67
RPAIN-216ENST00000575599 TNFRSF19Q9NS68 423 aa10.87□□□□□ -0.67
RPAIN-216ENST00000575599 A0A0U1RQK1 487 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 AIPO00170 330 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-216ENST00000575599 PSPNO60542 156 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 OR2H2O95918 312 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF44P15621 663 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 PRTN3P24158 256 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 HTR2CP28335 458 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 S100A5P33763 92 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 OR3A4PP47883 348 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 SCN1BQ07699 218 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 SLC9A3R2Q15599 337 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 NCR3LG1Q68D85 454 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 METAP1DQ6UB28 335 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-216ENST00000575599 C17orf107Q6ZR85 190 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 PNKDQ8N490 385 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 OR5D13Q8NGL4 314 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 ABRACLQ9P1F3 81 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 STEAP1Q9UHE8 339 aa10.86□□□□□ -0.67
RPAIN-216ENST00000575599 SLC17A2O00624 439 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 SH2D1BO14796 132 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 NPFFO15130 113 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 RGS5O15539 181 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 SLC2A2P11168 524 aaPredicted RBP10.85□□□□□ -0.67
RPAIN-216ENST00000575599 RSU1Q15404 277 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 C1orf122Q6ZSJ8 110 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 PXT1Q8NFP0 134 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 OR4S1Q8NGB4 309 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 OR10K1Q8NGX5 313 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 PPP1R35Q8TAP8 253 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 TBC1D15Q8TC07 691 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 TNFRSF14Q92956 283 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 SLC25A28Q96A46 364 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 BARHL1Q9BZE3 327 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 PPA2Q9H2U2 334 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 MMP27Q9H306 513 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 ZMAT3Q9HA38 289 aaKnown RBP10.85□□□□□ -0.67
RPAIN-216ENST00000575599 RHOFQ9HBH0 211 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 COMMD3Q9UBI1 195 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 ADAM30Q9UKF2 790 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 ING4Q9UNL4 249 aa10.85□□□□□ -0.67
RPAIN-216ENST00000575599 MRPS28Q9Y2Q9 187 aaKnown RBP10.85□□□□□ -0.67
RPAIN-216ENST00000575599 A0A0G2JK05 382 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 hCG_1809904A0A1W2PP81 198 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PPE2 198 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PR64 198 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 A0A1W2PRV1 198 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 ARSBP15848 533 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 COX7A1P24310 79 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 OR3A1P47881 315 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 P2RY14Q15391 338 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 C1orf100Q5SVJ3 147 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 Q6YL49 198 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 ZNF782Q6ZMW2 699 aaPredicted RBP10.84□□□□□ -0.67
RPAIN-216ENST00000575599 GCDHQ92947 438 aaPredicted RBP10.84□□□□□ -0.67
RPAIN-216ENST00000575599 GFI1Q99684 422 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 SLIRPQ9GZT3 109 aaKnown RBP10.84□□□□□ -0.67
RPAIN-216ENST00000575599 LIN7BQ9HAP6 207 aa10.84□□□□□ -0.67
RPAIN-216ENST00000575599 SEBOXQ9HB31 216 aaPredicted RBP10.84□□□□□ -0.67
RPAIN-216ENST00000575599 PCDHB16Q9NRJ7 776 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms