RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 Q8IYB0 196 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 MBD3L2Q8NHZ7 208 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 GTF3AQ92664 365 aaKnown RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 OBP2BQ9NPH6 170 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 ZNF71Q9NQZ8 489 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-208ENST00000574755 LUZP4Q9P127 313 aa11.95□□□□□ -0.5
VPS33B-208ENST00000574755 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-208ENST00000574755 GRPP07492 148 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 C20orf204Q6ZNR8 217 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 OR1S1Q8NH92 325 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 SECTM1Q8WVN6 248 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
VPS33B-208ENST00000574755 PHYHIPLQ96FC7 376 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 DMRTA2Q96SC8 542 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 SLC25A32Q9H2D1 315 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 SDHAF2Q9NX18 166 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 ARID1AO14497 2285 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 H0YL77 283 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 K7EM74 188 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 CGAP01215 116 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 P2RY6Q15077 328 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 ZNF565Q8N9K5 539 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 MED9Q9NWA0 146 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 PRR14LQ5THK1 2151 aa11.94□□□□□ -0.5
VPS33B-208ENST00000574755 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 NXPH2O95156 264 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 GLAP06280 429 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 CTXN2P0C2S0 81 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 GNRHRP30968 328 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 SNTB1Q13884 538 aaKnown RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 ASCL5Q7RTU5 278 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 LYZL2Q7Z4W2 148 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 CCDC28AQ8IWP9 274 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 RBMXL3Q8N7X1 1067 aaKnown RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 ANGPTL6Q8NI99 470 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 AQP10Q96PS8 301 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 TMEM100Q9NV29 134 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 TUBD1Q9UJT1 453 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 SCGB1D2O95969 90 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 ERVK11-1P61568 191 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 SMCO1Q147U7 214 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 PAN3Q58A45 887 aaKnown RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 Q6P435 159 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 LGI3Q8N145 548 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 MSI2Q96DH6 328 aaKnown RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 CNTNAP3BQ96NU0 1288 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 TP53RKQ96S44 253 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 CNTNAP3Q9BZ76 1288 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
VPS33B-208ENST00000574755 PURGQ9UJV8 347 aaKnown RBP11.93□□□□□ -0.5
VPS33B-208ENST00000574755 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 OR5H1A6NKK0 313 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 TMEM210A6NLX4 147 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 SIRPB1O00241 398 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 MPPED1O15442 326 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 OR2H2O95918 312 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 CRYABP02511 175 aaKnown RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 ZNF250P15622 560 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 MEX3BQ6ZN04 569 aaKnown RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 FAM185AQ8N0U4 392 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 REG4Q9BYZ8 158 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 BCL2L14Q9BZR8 327 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 FBXO9Q9UK97 447 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 FZR1Q9UM11 496 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 LSM5Q9Y4Y9 91 aaKnown RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 SESN1Q9Y6P5 492 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 TRBV6-6A0A0A6YYG2 114 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 IGHV1-18A0A0C4DH31 117 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 MLNRO43193 412 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-208ENST00000574755 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 FABP6P51161 128 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 ZNF818PQ6ZRF7 136 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 STOML3Q8TAV4 291 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 SLC5A7Q9GZV3 580 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 ZC4H2Q9NQZ6 224 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
VPS33B-208ENST00000574755 DCHS1Q96JQ0 3298 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms