RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	FABP12	A6NFH5	140 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	GPR37	O15354	613 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ADAM20	O43506	726 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	XRCC3	O43542	346 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ENSA	O43768	121 aa	Known RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ECD	O95905	644 aa	Predicted RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	EGR1	P18146	543 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	GLRA1	P23415	457 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	RBM11	P57052	281 aa	Known RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	HOXA4	Q00056	320 aa	Predicted RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	PITPNA	Q00169	270 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	IL13RA2	Q14627	380 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	MPV17L	Q2QL34	196 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	SMIM21	Q3B7S5	101 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	SPIN3	Q5JUX0	258 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	CNIH2	Q6PI25	160 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ACP7	Q6ZNF0	438 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	BPIFB2	Q8N4F0	458 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	EMG1	Q92979	244 aa	Known RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	SOST	Q9BQB4	213 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	RBFOX1	Q9NWB1	397 aa	Known RBP	11.9	□□□□□ -0.5
ABR-223	ENST00000573895	EXTL2	Q9UBQ6	330 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895	ST3GAL6	Q9Y274	331 aa		11.9	□□□□□ -0.5
ABR-223	ENST00000573895		A0A1W2PP11	408 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895		F8VVB4	439 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895		F8VWA3	439 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	SH2D1B	O14796	132 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	VENTX	O95231	258 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	KNG1	P01042	644 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	GYPA	P02724	150 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	PRKACA	P17612	351 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	MNDA	P41218	407 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	BPIFB3	P59826	476 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	ZNF146	Q15072	292 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	KLF17	Q5JT82	389 aa	Predicted RBP	11.89	□□□□□ -0.51
ABR-223	ENST00000573895	C9orf139	Q6ZV77	190 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	SLC36A1	Q7Z2H8	476 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	OR4M1	Q8NGD0	313 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	OR10R2	Q8NGX6	335 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	ZNF488	Q96MN9	340 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	KCNK15	Q9H427	330 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	IFT22	Q9H7X7	185 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	SPACA1	Q9HBV2	294 aa		11.89	□□□□□ -0.51
ABR-223	ENST00000573895	C22orf46	C9J442	243 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	TRIM77	I1YAP6	450 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	RAB27B	O00194	218 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	DVL1	O14640	695 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	TMPRSS2	O15393	492 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	GLA	P06280	429 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	FUT3	P21217	361 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	CDK2	P24941	298 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	BLVRB	P30043	206 aa	Predicted RBP	11.88	□□□□□ -0.51
ABR-223	ENST00000573895	VEGFC	P49767	419 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	SRSF2	Q01130	221 aa	Known RBP	11.88	□□□□□ -0.51
ABR-223	ENST00000573895	PLA2G7	Q13093	441 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	ZNF846	Q147U1	533 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	TMEM69	Q5SWH9	247 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	PYHIN1	Q6K0P9	492 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	FAM216A	Q8WUB2	273 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	NEDD4L	Q96PU5	975 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	SLC6A7	Q99884	636 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	WDR12	Q9GZL7	423 aa	Known RBP	11.88	□□□□□ -0.51
ABR-223	ENST00000573895	AKIP1	Q9NQ31	210 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	HSF4	Q9ULV5	492 aa		11.88	□□□□□ -0.51
ABR-223	ENST00000573895	IGHV3OR15-7	A0A075B7D8	119 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	GEMIN2	O14893	280 aa	Known RBP	11.87	□□□□□ -0.51
ABR-223	ENST00000573895	DEGS1	O15121	323 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	TAF9	Q16594	264 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	STUM	Q69YW2	141 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	FAM131A	Q6UXB0	335 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	RBMS3	Q6XE24	437 aa	Known RBP	11.87	□□□□□ -0.51
ABR-223	ENST00000573895		Q6ZTK2	550 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	CHST4	Q8NCG5	386 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	RAB3C	Q96E17	227 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
ABR-223	ENST00000573895	DNAJB11	Q9UBS4	358 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	ZNF69	Q9UC07	566 aa		11.87	□□□□□ -0.51
ABR-223	ENST00000573895	TRAV18	A0A075B6X5	111 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.86	□□□□□ -0.51
ABR-223	ENST00000573895	CTDSPL	O15194	276 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	SOCS1	O15524	211 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	FCN3	O75636	299 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	GSTP1	P09211	210 aa	Known RBP	11.86	□□□□□ -0.51
ABR-223	ENST00000573895	GABRR1	P24046	479 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	LMO1	P25800	156 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	CD40LG	P29965	261 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	TMEM50B	P56557	158 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	MRPS10	P82664	201 aa	Known RBP	11.86	□□□□□ -0.51
ABR-223	ENST00000573895	IL18	Q14116	193 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	PIGY	Q3MUY2	71 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	CDNF	Q49AH0	187 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	ZNF788	Q6ZQV5	615 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	BTN2A1	Q7KYR7	527 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	ANGPTL6	Q8NI99	470 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	MED30	Q96HR3	178 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	CCL13	Q99616	98 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	NICN1	Q9BSH3	213 aa		11.86	□□□□□ -0.51
ABR-223	ENST00000573895	WDR13	Q9H1Z4	485 aa		11.86	□□□□□ -0.51

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