RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 PRRX1P54821 245 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 CDC42P60953 191 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 RPS7P62081 194 aaKnown RBP6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 MS4A2Q01362 244 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 EBI3Q14213 229 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 SNAPC1Q16533 368 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 C17orf58Q2M2W7 97 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 ZNF829Q3KNS6 432 aaPredicted RBP6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 PRAMEF5Q5TYX0 476 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 COMMD2Q86X83 199 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 SBSPONQ8IVN8 264 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 DEFB107AQ8IZN7 70 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 C5orf56Q8N8D9 126 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 KLHL30-AS1Q8NEE0 82 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 TRMT10AQ8TBZ6 339 aaKnown RBP6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 EMG1Q92979 244 aaKnown RBP6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 SLAMF9Q96A28 289 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 DUX3Q96PT4 197 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 MOB1AQ9H8S9 216 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 SLC25A19Q9HC21 320 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 MRM2Q9UI43 246 aaKnown RBP6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 LINC00527Q9UJ94 153 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 R4GMQ9 66 aa6.35□□□□□ -1.39
NPLOC4-211ENST00000573212 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 TRGV10A0A0A0MS01 117 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 TRBV2A0A0J9YWF9 115 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 SERPINE3A8MV23 424 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 CCRL2O00421 344 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 ENTPD6O75354 484 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 MRPL3P09001 348 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 DUSP1P28562 367 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 MNDAP41218 407 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 CDX1P47902 265 aaPredicted RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 GLIPR1P48060 266 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 ACTR3P61158 418 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 EFNB1P98172 346 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 AESQ08117 197 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 TMEM236Q5W0B7 351 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 CCDC144NLQ6NUI1 221 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 TEX38Q6PEX7 206 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 ZNF322Q6U7Q0 402 aaPredicted RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 SLC25A26Q70HW3 274 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 Q8IYB0 196 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 FAM58AQ8N1B3 248 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 STPG2Q8N412 459 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 DNAAF1Q8NEP3 725 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 MNTQ99583 582 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 GAL3ST2Q9H3Q3 398 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 SEPSECSQ9HD40 501 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 ARL8BQ9NVJ2 186 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 MRPS18AQ9NVS2 196 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 RBFOX1Q9NWB1 397 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 IKZF2Q9UKS7 526 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 SNX5Q9Y5X3 404 aa6.34□□□□□ -1.39
NPLOC4-211ENST00000573212 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 IGKV1-9A0A0C4DH69 117 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 FAM172BPA6NC97 362 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 TOR1AO14656 332 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 OR2H2O95918 312 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 CSN2P05814 226 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 LYL1P12980 280 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 BCL3P20749 454 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 CXCR4P61073 352 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 RAP2BP61225 183 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 SLC35B1P78383 322 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 FHL3Q13643 280 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 DIAPH2-AS1Q14236 149 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 KPNB1Q14974 876 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 FAM98BQ52LJ0 330 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 BCL2L15Q5TBC7 163 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 Q6P435 159 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 C16orf89Q6UX73 402 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 PLEKHG7Q6ZR37 379 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 LCNL1Q6ZST4 164 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 MEPCEQ7L2J0 689 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 SLC35E3Q7Z769 313 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 TRAPPC6BQ86SZ2 158 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 CATSPERDQ86XM0 798 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 CCDC54Q8NEL0 328 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 Q8NFD4 153 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 OR9G1Q8NH87 305 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 C10orf35Q96D05 121 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 BORCS8Q96FH0 119 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 COQ2Q96H96 371 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 RCHY1Q96PM5 261 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 TTTY10Q9BZA0 68 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 CHST5Q9GZS9 411 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 COMMD4Q9H0A8 199 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 HMG20AQ9NP66 347 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 PCDHB16Q9NRJ7 776 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 TVP23BQ9NYZ1 205 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 GLS2Q9UI32 602 aa6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 ZNF256Q9Y2P7 627 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-211ENST00000573212 SMAD5-AS1Q9Y6J3 95 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms