RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 LEAP2Q969E1 77 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 RBM14Q96PK6 669 aaKnown RBP14.43□□□□□ -0.1
CHD3-214ENST00000572579 LINC00574Q9H8X3 128 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 FGF20Q9NP95 211 aaPredicted RBP14.43□□□□□ -0.1
CHD3-214ENST00000572579 KIF25Q9UIL4 384 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 DHDHQ9UQ10 334 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 FUOMA2VDF0 154 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A18PA6NE21 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A16PA6NEW6 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A20PA6NIJ5 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A9PA6NNJ1 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A12PA8MX19 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A5PA8MXJ8 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 H0YJX3 145 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 LPLP06858 475 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A15PP0C7V4 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A13PP0C7W8 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A14PP0C7W9 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 FAM90A24PP0C7X0 464 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 OR3A4PP47883 348 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 MTNR1BP49286 362 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 GBX2P52951 348 aaPredicted RBP14.42□□□□□ -0.1
CHD3-214ENST00000572579 ABCA11PQ4W5N1 156 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 OR2G6Q5TZ20 316 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 RSBN1Q5VWQ0 802 aaPredicted RBP14.42□□□□□ -0.1
CHD3-214ENST00000572579 CCDC121Q6ZUS5 278 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 WFDC9Q8NEX5 89 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 Q96MT0 163 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 SLC25A33Q9BSK2 321 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 JAM3Q9BX67 310 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 LIN7BQ9HAP6 207 aa14.42□□□□□ -0.1
CHD3-214ENST00000572579 RPL36Q9Y3U8 105 aaKnown RBP14.42□□□□□ -0.1
CHD3-214ENST00000572579 A0A1W2PRX2 142 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 ZNF729A6NN14 1252 aaPredicted RBP14.41□□□□□ -0.1
CHD3-214ENST00000572579 NPIPB11E5RHQ5 1161 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 MPZL2O60487 215 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 OR2F2O95006 317 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 CDRT1O95170 752 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 CLIC3O95833 236 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 LALBAP00709 142 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 FAM53AQ6NSI3 398 aaPredicted RBP14.41□□□□□ -0.1
CHD3-214ENST00000572579 SATL1Q86VE3 508 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 OR4D6Q8NGJ1 314 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 RFESDQ8TAC1 157 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 TNFAIP8L1Q8WVP5 186 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 STMN2Q93045 179 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 CALYQ9NYX4 217 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 CLEC2DQ9UHP7 191 aa14.41□□□□□ -0.1
CHD3-214ENST00000572579 MEIKINA0A087WXM9 373 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 CCDC159P0C7I6 412 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 RAB3AP20336 220 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 NFYBP25208 207 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 C16orf82Q7Z2V1 217 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 OR13C5Q8NGS8 318 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 TSEN15Q8WW01 171 aaKnown RBP14.4□□□□□ -0.1
CHD3-214ENST00000572579 MRPL48Q96GC5 212 aaKnown RBP14.4□□□□□ -0.1
CHD3-214ENST00000572579 CYYR1Q96J86 154 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 NCOR1P1Q9H4R4 102 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 OR6C3Q9NZP0 311 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 PSG11Q9UQ72 335 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 PCDHGB5Q9Y5G0 923 aa14.4□□□□□ -0.1
CHD3-214ENST00000572579 DNAH9Q9NYC9 4486 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 J3QR06 171 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 TOR1AO14656 332 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 OGG1O15527 345 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 PEX14O75381 377 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 BRS3P32247 399 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 GLP1RP43220 463 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 PRRX1P54821 245 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 PAX5Q02548 391 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 MRPL28Q13084 256 aaKnown RBP14.39□□□□□ -0.11
CHD3-214ENST00000572579 DOC2BQ14184 412 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 RBM39Q14498 530 aaKnown RBP14.39□□□□□ -0.11
CHD3-214ENST00000572579 KLHL22Q53GT1 634 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 PAN3Q58A45 887 aaKnown RBP14.39□□□□□ -0.11
CHD3-214ENST00000572579 ZNF485Q8NCK3 441 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 OR4F17Q8NGA8 305 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 OR9G1Q8NH87 305 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 MRGPRDQ8TDS7 321 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 MYDGFQ969H8 173 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 PHF21AQ96BD5 680 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 OR4F4Q96R69 305 aa14.39□□□□□ -0.11
CHD3-214ENST00000572579 A0A1W2PPI3 338 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 MAGEA13PA6NCF6 341 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 IL1AP01583 271 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 ALDOBP05062 364 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 RPSAP08865 295 aaKnown RBP14.38□□□□□ -0.11
CHD3-214ENST00000572579 IGLL1P15814 213 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 SSTR5P35346 364 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 RPS11P62280 158 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHD3-214ENST00000572579 IL13RA2Q14627 380 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 LTC4SQ16873 150 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 ARSJQ5FYB0 599 aaPredicted RBP14.38□□□□□ -0.11
CHD3-214ENST00000572579 RPL22L1Q6P5R6 122 aaKnown RBP14.38□□□□□ -0.11
CHD3-214ENST00000572579 CENPVQ7Z7K6 275 aaPredicted RBP14.38□□□□□ -0.11
CHD3-214ENST00000572579 DRAM1Q8N682 238 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 SUMF2Q8NBJ7 301 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
CHD3-214ENST00000572579 RBMXL1Q96E39 390 aaKnown RBP14.38□□□□□ -0.11
CHD3-214ENST00000572579 AURKAIP1Q9NWT8 199 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms