RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 PRAMEF5Q5TYX0 476 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 OR52W1Q6IF63 320 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 IZUMO2Q6UXV1 221 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 HEPN1Q6WQI6 88 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 Q6ZSV7 163 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 JAGN1Q8N5M9 183 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 LINC01006Q8NI28 216 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 OR5M11Q96RB7 305 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 CLEC7AQ9BXN2 247 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 PPIL3Q9H2H8 161 aaKnown RBP16.32■□□□□ 0.2
NUP88-204ENST00000572290 OR6C3Q9NZP0 311 aa16.32■□□□□ 0.2
NUP88-204ENST00000572290 PIN1P1O15428 100 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 MAS1P04201 325 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 SERPINA2P20848 420 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 KCNJ3P48549 501 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 HSPA13P48723 471 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 MED22Q15528 200 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 CDH26Q8IXH8 852 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 DYNAPQ8N1N2 210 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 MS4A15Q8N5U1 240 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 MUL1Q969V5 352 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 BARHL1Q9BZE3 327 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 DUSP21Q9H596 190 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 LSM2Q9Y333 95 aaKnown RBP16.31■□□□□ 0.2
NUP88-204ENST00000572290 RNF114Q9Y508 228 aa16.31■□□□□ 0.2
NUP88-204ENST00000572290 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 TSPAN9O75954 239 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 OR7C1O76099 320 aaPredicted RBP16.3■□□□□ 0.2
NUP88-204ENST00000572290 GTF2F2P13984 249 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 RBM11P57052 281 aaKnown RBP16.3■□□□□ 0.2
NUP88-204ENST00000572290 GPR176Q14439 515 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 IRF3Q14653 427 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 FAM189A2Q15884 450 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 SSX2Q16385 188 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 SLC22A6Q4U2R8 563 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 LDLRAD2Q5SZI1 272 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 MINOS1Q5TGZ0 78 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 LINC00596Q86U02 117 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 ABHD12Q8N2K0 398 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 OR4D6Q8NGJ1 314 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 PIFOQ8TCI5 191 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 WFDC12Q8WWY7 111 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 NCOR1P1Q9H4R4 102 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 C16orf95Q9H693 158 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 IFT22Q9H7X7 185 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 MRPS28Q9Y2Q9 187 aaKnown RBP16.3■□□□□ 0.2
NUP88-204ENST00000572290 MINOS1-NBL1R4GNA1 71 aa16.3■□□□□ 0.2
NUP88-204ENST00000572290 MEIKINA0A087WXM9 373 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 A0A1W2PP11 408 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 ZNF729A6NN14 1252 aaPredicted RBP16.29■□□□□ 0.2
NUP88-204ENST00000572290 GEMIN2O14893 280 aaKnown RBP16.29■□□□□ 0.2
NUP88-204ENST00000572290 RGS10O43665 173 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 GLP1RP43220 463 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 MPV17LQ2QL34 196 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 ACSM3Q53FZ2 586 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 GLIPR1L1Q6UWM5 242 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 UNQ9370/PRO34162Q6UXP9 181 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 BAIAP2L2Q6UXY1 529 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 RTN4RL2Q86UN3 420 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 ZNF565Q8N9K5 539 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 SUMF2Q8NBJ7 301 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 NDNFQ8TB73 568 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 TMED9Q9BVK6 235 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 DPCDQ9BVM2 203 aaPredicted RBP16.29■□□□□ 0.2
NUP88-204ENST00000572290 RAB18Q9NP72 206 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 ABCB10Q9NRK6 738 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 ZNF581Q9P0T4 197 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 KIF25Q9UIL4 384 aa16.29■□□□□ 0.2
NUP88-204ENST00000572290 GDNFP39905 211 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 PAX5Q02548 391 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 C17orf58Q2M2W7 97 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
NUP88-204ENST00000572290 AWAT2Q6E213 333 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 LIAT1Q6ZQX7 453 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 NKAIN3Q8N8D7 197 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 OR13A1Q8NGR1 328 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 PLPPR1Q8TBJ4 325 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 HILPDAQ9Y5L2 63 aa16.28■□□□□ 0.2
NUP88-204ENST00000572290 KBTBD11-OT1A0A1B0GTJ5 212 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 MEGF11A6BM72 1044 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 ATP6V1G2O95670 118 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CGB3P0DN86 165 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CGB7P0DN87 165 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CRHBPP24387 322 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 HTR1DP28221 377 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 RAB13P51153 203 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 PROK1P58294 105 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 GPR50Q13585 617 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 INSL4Q14641 139 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 ATAD3CQ5T2N8 411 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 SLC35E4Q6ICL7 350 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 LYPD6Q86Y78 171 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 OR4P4Q8NGL7 312 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 ZNF596Q8TC21 504 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 UFD1Q92890 307 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CNBD2Q96M20 576 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CCDC90BQ9GZT6 254 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 TCF7L1Q9HCS4 588 aa16.27■□□□□ 0.2
NUP88-204ENST00000572290 CALYQ9NYX4 217 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms