RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 SPATA24Q86W54 205 aa15.03■□□□□ -0
NUP88-203ENST00000572019 OR51A4Q8NGJ6 313 aa15.03■□□□□ -0
NUP88-203ENST00000572019 OPALINQ96PE5 141 aa15.03■□□□□ -0
NUP88-203ENST00000572019 IGHV3-72A0A0B4J1Y9 119 aa15.02■□□□□ -0
NUP88-203ENST00000572019 FGF16O43320 207 aa15.02■□□□□ -0
NUP88-203ENST00000572019 CYB5AP00167 134 aa15.02■□□□□ -0
NUP88-203ENST00000572019 SLC6A1P30531 599 aa15.02■□□□□ -0
NUP88-203ENST00000572019 NANOS3P60323 173 aaKnown RBP15.02■□□□□ -0
NUP88-203ENST00000572019 FAM53AQ6NSI3 398 aaPredicted RBP15.02■□□□□ -0
NUP88-203ENST00000572019 LHFPL2Q6ZUX7 228 aa15.02■□□□□ -0
NUP88-203ENST00000572019 UTS2BQ765I0 119 aa15.02■□□□□ -0
NUP88-203ENST00000572019 RFESDQ8TAC1 157 aa15.02■□□□□ -0
NUP88-203ENST00000572019 UTP4Q969X6 686 aaKnown RBP15.02■□□□□ -0
NUP88-203ENST00000572019 C10orf35Q96D05 121 aa15.02■□□□□ -0
NUP88-203ENST00000572019 CALYQ9NYX4 217 aa15.02■□□□□ -0
NUP88-203ENST00000572019 ZNF581Q9P0T4 197 aa15.02■□□□□ -0
NUP88-203ENST00000572019 KIF25Q9UIL4 384 aa15.02■□□□□ -0
NUP88-203ENST00000572019 GNG8Q9UK08 70 aa15.02■□□□□ -0
NUP88-203ENST00000572019 TCRBV3S1A0A5B6 114 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 FUOMA2VDF0 154 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 SEC14L6B5MCN3 397 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 SULT1C4O75897 302 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 OR2T7P0C7T2 308 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 CALB2P22676 271 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 POLR2IP36954 125 aaKnown RBP15.01□□□□□ -0.01
NUP88-203ENST00000572019 REG1BP48304 166 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 GID4Q8IVV7 300 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 OR2G2Q8NGZ5 317 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 MUC7Q8TAX7 377 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 DNAJC9Q8WXX5 260 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 OSBPL10Q9BXB5 764 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 FRRS1LQ9P0K9 344 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 BIRC6Q9NR09 4857 aa15.01□□□□□ -0.01
NUP88-203ENST00000572019 DNAH1Q9P2D7 4330 aa15□□□□□ -0.01
NUP88-203ENST00000572019 ZFPL1O95159 310 aa15□□□□□ -0.01
NUP88-203ENST00000572019 UBCP0CG48 685 aaKnown RBP15□□□□□ -0.01
NUP88-203ENST00000572019 PRKACBP22694 351 aa15□□□□□ -0.01
NUP88-203ENST00000572019 GPR12P47775 334 aa15□□□□□ -0.01
NUP88-203ENST00000572019 SLC35B1P78383 322 aa15□□□□□ -0.01
NUP88-203ENST00000572019 MADCAM1Q13477 382 aa15□□□□□ -0.01
NUP88-203ENST00000572019 C9orf66Q5T8R8 295 aa15□□□□□ -0.01
NUP88-203ENST00000572019 COMMD1Q8N668 190 aa15□□□□□ -0.01
NUP88-203ENST00000572019 CCDC54Q8NEL0 328 aa15□□□□□ -0.01
NUP88-203ENST00000572019 OR51T1Q8NGJ9 327 aa15□□□□□ -0.01
NUP88-203ENST00000572019 OR13C9Q8NGT0 318 aa15□□□□□ -0.01
NUP88-203ENST00000572019 PLPPR1Q8TBJ4 325 aa15□□□□□ -0.01
NUP88-203ENST00000572019 NRBF2Q96F24 287 aa15□□□□□ -0.01
NUP88-203ENST00000572019 MBOAT4Q96T53 435 aa15□□□□□ -0.01
NUP88-203ENST00000572019 KRT84Q9NSB2 600 aa15□□□□□ -0.01
NUP88-203ENST00000572019 IDI2-AS1Q9NZ38 188 aa15□□□□□ -0.01
NUP88-203ENST00000572019 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
NUP88-203ENST00000572019 TRAV24A0A0B4J272 114 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 DEGS1O15121 323 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 HTR1FP30939 366 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 SSTR5P35346 364 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 ZP1P60852 638 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 BNIP1Q12981 228 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 KIR2DS1Q14954 304 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 TEX38Q6PEX7 206 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 SBSPONQ8IVN8 264 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 FOXRED2Q8IWF2 684 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 Q8N6K4 173 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 Q8N9W7 124 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 OR5M8Q8NGP6 311 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 MRGPRDQ8TDS7 321 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 SPSB1Q96BD6 273 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 EAF1Q96JC9 268 aaPredicted RBP14.99□□□□□ -0.01
NUP88-203ENST00000572019 HRASLS5Q96KN8 279 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 PRRG3Q9BZD7 231 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 NEK6Q9HC98 313 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 PCDHB16Q9NRJ7 776 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 OR6C3Q9NZP0 311 aa14.99□□□□□ -0.01
NUP88-203ENST00000572019 AMMECR1Q9Y4X0 333 aaPredicted RBP14.99□□□□□ -0.01
NUP88-203ENST00000572019 MEIKINA0A087WXM9 373 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 NPIPB11E5RHQ5 1161 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 H0YJX3 145 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 IL1AP01583 271 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 ZNF20P17024 532 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 CFHR3Q02985 330 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 EBI3Q14213 229 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 FLOT2Q14254 428 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 PNLIPRP3Q17RR3 467 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 ASPHD1Q5U4P2 390 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 CHST4Q8NCG5 386 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 OR8U1Q8NH10 309 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 NR1H4Q96RI1 486 aaPredicted RBP14.98□□□□□ -0.01
NUP88-203ENST00000572019 HSPB9Q9BQS6 159 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 LINC00574Q9H8X3 128 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 PLSCR3Q9NRY6 295 aa14.98□□□□□ -0.01
NUP88-203ENST00000572019 ZMAT5Q9UDW3 170 aaKnown RBP14.98□□□□□ -0.01
NUP88-203ENST00000572019 IGHV1-3A0A0C4DH29 117 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 ZNF736B4DX44 427 aaPredicted RBP14.97□□□□□ -0.01
NUP88-203ENST00000572019 CHATP28329 748 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 CDX1P47902 265 aaPredicted RBP14.97□□□□□ -0.01
NUP88-203ENST00000572019 RAB7AP51149 207 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 GPR50Q13585 617 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 FHL3Q13643 280 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 ZNF260Q3ZCT1 412 aa14.97□□□□□ -0.01
NUP88-203ENST00000572019 RSBN1Q5VWQ0 802 aaPredicted RBP14.97□□□□□ -0.01
NUP88-203ENST00000572019 KDM4DQ6B0I6 523 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms