RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 TPRKBQ9Y3C4 175 aa8.29□□□□□ -1.08
GTF3C1-213ENST00000571886 LRRC42Q9Y546 428 aa8.29□□□□□ -1.08
GTF3C1-213ENST00000571886 SESN1Q9Y6P5 492 aa8.29□□□□□ -1.08
GTF3C1-213ENST00000571886 IGHV2-26A0A0B4J1V2 119 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 hCG_1809904A0A1W2PP81 198 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 A0A1W2PPE2 198 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 A0A1W2PR64 198 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 A0A1W2PRV1 198 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RGS10O43665 173 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 SC5DO75845 299 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RBP4P02753 201 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 CRYBA1P05813 215 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RAG2P55895 527 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RBM11P57052 281 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RPS25P62851 125 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 DYNC1I2Q13409 638 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 PAN3Q58A45 887 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 RSBN1Q5VWQ0 802 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 GLIPR1L1Q6UWM5 242 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 CCBE1Q6UXH8 406 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 TMEM91Q6ZNR0 172 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 Q6ZSV7 163 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 JAGN1Q8N5M9 183 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 SUMF2Q8NBJ7 301 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 TMEM104Q8NE00 496 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 OR13A1Q8NGR1 328 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 TMEM203Q969S6 136 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 CPNE2Q96FN4 548 aaPredicted RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 CCDC90BQ9GZT6 254 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 BANF2Q9H503 90 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 KIF25Q9UIL4 384 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 VPREB3Q9UKI3 123 aa8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 MRPS28Q9Y2Q9 187 aaKnown RBP8.28□□□□□ -1.08
GTF3C1-213ENST00000571886 TRGV10A0A0A0MS01 117 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 CLPXO76031 633 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 OR7C1O76099 320 aaPredicted RBP8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 NDUFA7O95182 113 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 CSTBP04080 98 aaKnown RBP8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 HSMCR30P0CW71 290 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 CDK2P24941 298 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 HSPA13P48723 471 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 LGALS4P56470 323 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 TPBGQ13641 420 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 SSX2Q16385 188 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 NHLRC3Q5JS37 347 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 RBM48Q5RL73 367 aaKnown RBP8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 FAM53AQ6NSI3 398 aaPredicted RBP8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 HEPN1Q6WQI6 88 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 PRSS48Q7RTY5 328 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 CEACAM19Q7Z692 300 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 LINC01006Q8NI28 216 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 GFI1Q99684 422 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 DPCDQ9BVM2 203 aaPredicted RBP8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 TMEM133Q9H2Q1 129 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF286AQ9HBT8 521 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 TAS2R3Q9NYW6 316 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 CKLFQ9UBR5 152 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 RAB26Q9ULW5 256 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 HILPDAQ9Y5L2 63 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
GTF3C1-213ENST00000571886 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 MEIKINA0A087WXM9 373 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 FUOMA2VDF0 154 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 CHST1O43916 411 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 IGHV3-7P01780 117 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 CPEP16870 476 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 SRMP19623 302 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 GPR50Q13585 617 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 FAM189A2Q15884 450 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 LRRC75BQ2VPJ9 315 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 ATAD3CQ5T2N8 411 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 OLFML2AQ68BL7 652 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 AWAT2Q6E213 333 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 SIGIRRQ6IA17 410 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 SLC35E4Q6ICL7 350 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 OR10K2Q6IF99 312 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 GDPGP1Q6ZNW5 385 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 C5orf24Q7Z6I8 188 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 CDH26Q8IXH8 852 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 ABHD12Q8N2K0 398 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 MS4A15Q8N5U1 240 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 OR4P4Q8NGL7 312 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 OR4F5Q8NH21 305 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 RFESDQ8TAC1 157 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 MRGPRDQ8TDS7 321 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 UFD1Q92890 307 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 LEAP2Q969E1 77 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 FOXRED1Q96CU9 486 aaPredicted RBP8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 MALSU1Q96EH3 234 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 S100A13Q99584 98 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 MGLLQ99685 303 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 CLEC7AQ9BXN2 247 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 SLITRK2Q9H156 845 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 KCNK15Q9H427 330 aa8.26□□□□□ -1.09
GTF3C1-213ENST00000571886 IFT22Q9H7X7 185 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms