RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MNTQ99583 582 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 ALG8Q9BVK2 526 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 MED20Q9H944 212 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 TAS2R5Q9NYW4 299 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 GLS2Q9UI32 602 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 UGT2A1Q9Y4X1 527 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 PEX16Q9Y5Y5 336 aa5.43□□□□□ -1.54
CHD3-213ENST00000571249 LOC100506127A0A0U1RQW1 187 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 hCG_1809904A0A1W2PP81 198 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 A0A1W2PPE2 198 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 A0A1W2PR64 198 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 DAPL1A0PJW8 107 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 HIST1H2ABP04908 130 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 SPI1P17947 270 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 LAP3P28838 519 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 SLC6A1P30531 599 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 SOX6P35712 828 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 RPS19P39019 145 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 CD200P41217 278 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 CDKN2AP42771 156 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 RORCP51449 518 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 BLVRAP53004 296 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 ACTA2P62736 377 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 RPS25P62851 125 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 ACTG2P63267 376 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 ZNF674Q2M3X9 581 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 CCDC58Q4VC31 144 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 C10orf128Q5T292 105 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 ZNF684Q5T5D7 378 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 FAM27D1Q5T7N8 215 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 FAM27BQ5VT28 67 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 DMKNQ6E0U4 476 aaPredicted RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 TMEM91Q6ZNR0 172 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 HIST3H2AQ7L7L0 130 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 SHFQ7M4L6 423 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 NANOGNBQ7Z5D8 188 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 CCDC190Q86UF4 302 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 OSR2Q8N2R0 312 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 CYB561A3Q8NBI2 242 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 SETD6Q8TBK2 473 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 PHYHIPQ92561 330 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 HIST1H2ACQ93077 130 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 MRPL48Q96GC5 212 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 Q96M85 177 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 KCTD7Q96MP8 289 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 CNN2Q99439 309 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 WACQ9BTA9 647 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 OR51V1Q9H2C8 321 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 HIPK2Q9H2X6 1198 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 OPA3Q9H6K4 179 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 RNF167Q9H6Y7 350 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 ISG20L2Q9H9L3 353 aaKnown RBP5.42□□□□□ -1.54
CHD3-213ENST00000571249 C1orf123Q9NWV4 160 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 GSTK1Q9Y2Q3 226 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 ADAM18Q9Y3Q7 739 aa5.42□□□□□ -1.54
CHD3-213ENST00000571249 IGLV1-36A0A0B4J1U3 117 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 IGKV1D-43A0A0B4J1Z2 117 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TEX13CA0A0J9YWL9 993 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 PNMA8CA0A1B0GUJ8 204 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 A0A1W2PQL4 384 aaPredicted RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 PSMB11A5LHX3 300 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 FAM90A7PA6NKC0 464 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 FAM90A22PA8MWA6 464 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 FAM90A12PA8MX19 464 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 FAM90A23PA8MXZ1 464 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 IQCF6A8MYZ5 107 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 B5MCH6 92 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 BLOC1S5-TXNDC5H3BN57 136 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 GABRPO00591 440 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 RNF13O43567 381 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 SULT1C4O75897 302 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 BRI3O95415 125 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 CST2P09228 141 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 IGHV4-30-4P0DP06 118 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 CLUP10909 449 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 CELP19835 753 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 CFL1P23528 166 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 COX7A1P24310 79 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 GDNFP39905 211 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TGM4P49221 684 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 RPL27P61353 136 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 PCBD1P61457 104 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 FABP5Q01469 135 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 MRPL28Q13084 256 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 KRR1Q13601 381 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 HAGHQ16775 308 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 KLHL12Q53G59 568 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 MESTQ5EB52 335 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 WDR38Q5JTN6 314 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TEX36Q5VZQ5 186 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 RPL22L1Q6P5R6 122 aaKnown RBP5.41□□□□□ -1.54
CHD3-213ENST00000571249 FBXW12Q6X9E4 464 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ZNF826PQ6ZT77 177 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 SLC16A9Q7RTY1 509 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ZNF329Q86UD4 541 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TPRA1Q86W33 373 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 ZNF695Q8IW36 515 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 SLC35F2Q8IXU6 374 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 TIGD4Q8IY51 512 aa5.41□□□□□ -1.54
CHD3-213ENST00000571249 MKXQ8IYA7 352 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms