RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 CLN8Q9UBY8 286 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF222Q9UK12 451 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 HSF4Q9ULV5 492 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 FLNCQ14315 2725 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
CTDNEP1-204ENST00000570484 MEIKINA0A087WXM9 373 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRAV24A0A0B4J272 114 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A1W2PPH5 198 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A1W2PQ09 198 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 MFNGO00587 321 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 DVL1O14640 695 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 MGST3O14880 152 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 CA11O75493 328 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TPPPO94811 219 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TFF1P04155 84 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TK1P04183 234 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 CSN2P05814 226 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 LPLP06858 475 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 ATF4P18848 351 aaPredicted RBP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 PTBP1P26599 531 aaKnown RBP eCLIP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 GIFP27352 417 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 PRSS3P35030 304 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 RBMXP38159 391 aaKnown RBP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 CBX5P45973 191 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR3A1P47881 315 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 NPY4RP50391 375 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 P2RX3P56373 397 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 ARPC4P59998 168 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 GNB2P62879 340 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 KRBOX4Q5JUW0 171 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 C6orf183Q5T699 404 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 HACD4Q5VWC8 232 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 SHEQ5VZ18 495 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q6P435 159 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF788Q6ZQV5 615 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 CCDC190Q86UF4 302 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAM185AQ8N0U4 392 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q8N402 240 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 BPIFB2Q8N4F0 458 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNRF1Q8ND25 227 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 C10orf105Q8TEF2 133 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 NUDCD2Q8WVJ2 157 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 FCAMRQ8WWV6 532 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 SULT4A1Q9BR01 284 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAAP24Q9BTP7 215 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 SSBP3Q9BWW4 388 aaPredicted RBP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 RIMS4Q9H426 269 aaPredicted RBP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 AUNIPQ9H7T9 357 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 SEBOXQ9HB31 216 aaPredicted RBP5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 SCPEP1Q9HB40 452 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM165Q9HC07 324 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 RAB9BQ9NP90 201 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 KAAG1Q9UBP8 84 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 AK3Q9UIJ7 227 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRAPPC2LQ9UL33 140 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 MGAT4AQ9UM21 535 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 V9GYH0 126 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 COL12A1Q99715 3063 aa5.49□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRGV10A0A0A0MS01 117 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRBV23-1A0A0A0MS06 115 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 KIR2DS1A0A191URI9 304 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 hADV38S2A0JD32 116 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 MEIS3P1A6NDR6 274 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 GABARAPH6UMI1 98 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 K7N7A8 449 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 SULT1C2O00338 296 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 PSPNO60542 156 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF737O75373 536 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 IGHV2-5P01817 119 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 CSF1P09603 554 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 SELLP14151 372 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 AMY2BP19961 511 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 LMO1P25800 156 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 RCVRNP35243 200 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ETV6P41212 452 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 KIR2DS4P43632 304 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 AP3S2P59780 193 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 KIR2DS1Q14954 304 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF260Q3ZCT1 412 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 PLAC9Q5JTB6 97 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ATPAF1Q5TC12 328 aaPredicted RBP5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 SIGIRRQ6IA17 410 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 C16orf87Q6PH81 154 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 TRAT1Q6PIZ9 186 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 C17orf107Q6ZR85 190 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 GDPD1Q8N9F7 314 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR4S1Q8NGB4 309 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 CLDND2Q8NHS1 167 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 SMIM4Q8WVI0 70 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 DYRK2Q92630 601 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 GCDHQ92947 438 aaPredicted RBP5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 CCDC32Q9BV29 185 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 GAL3ST2Q9H3Q3 398 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 C7orf69Q9H7B7 122 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 PATZ1Q9HBE1 687 aaKnown RBP5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF286AQ9HBT8 521 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 AKIP1Q9NQ31 210 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 KCNIP1Q9NZI2 227 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms