RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LIN7BQ9HAP6 207 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TMEM138Q9NPI0 162 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TAS2R4Q9NYW5 299 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 ZNF281Q9Y2X9 895 aa13.71□□□□□ -0.21
MAP1LC3B-208ENST00000570189 TGP01266 2768 aa13.71□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 H0YJX3 145 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 MYL12AP19105 171 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BRS3P32247 399 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 GDNFP39905 211 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CEACAM3P40198 252 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 MED21Q13503 144 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ATXN7L3Q14CW9 347 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 DMKNQ6E0U4 476 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 SLC16A12Q6ZSM3 486 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ZNF565Q8N9K5 539 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR10A7Q8NGE5 316 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TNFAIP8L1Q8WVP5 186 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 KIRREL1Q96J84 757 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 NKX3-1Q99801 234 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BARHL1Q9BZE3 327 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PPIL3Q9H2H8 161 aaKnown RBP13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ZNF286AQ9HBT8 521 aa13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 SIRT4Q9Y6E7 314 aaPredicted RBP13.7□□□□□ -0.22
MAP1LC3B-208ENST00000570189 NPIPB11E5RHQ5 1161 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BUB1B-PAK6H3BSN5 160 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 IGFBP3P17936 291 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FSTP19883 344 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 SOX2P48431 317 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PRRX1P54821 245 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 SCN1BQ07699 218 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RSU1Q15404 277 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PAN3Q58A45 887 aaKnown RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 YIF1BQ5BJH7 314 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RSBN1Q5VWQ0 802 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CCDC144NLQ6NUI1 221 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BAIAP2L2Q6UXY1 529 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FAM110DQ8TAY7 271 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 AKR1E2Q96JD6 320 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 GPER1Q99527 375 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OCSTAMPQ9BR26 566 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PCDHB16Q9NRJ7 776 aa13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PAK1IP1Q9NWT1 392 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ZNF780AO75290 641 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FBXO24O75426 580 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CLIC3O95833 236 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 LALBAP00709 142 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 IL1AP01583 271 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CD1AP06126 327 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 VSIG10L2P0DP72 767 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 JUNBP17275 347 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 C21orf33P30042 268 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BDKRB2P30411 391 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RBM11P57052 281 aaKnown RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RPS11P62280 158 aaKnown RBP eCLIP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 BLCAPP62952 87 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PPP3R1P63098 170 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 EMX1Q04741 257 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 HABP2Q14520 560 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 KPRPQ5T749 579 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 NDUFA11Q86Y39 141 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 DHRSXQ8N5I4 330 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR9G1Q8NH87 305 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PGLYRP3Q96LB9 341 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 METTL9Q9H1A3 318 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 MMP28Q9H239 520 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 KIF25Q9UIL4 384 aa13.68□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TOR1AO14656 332 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CASQ2O14958 399 aaPredicted RBP13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR2F2O95006 317 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR3A4PP47883 348 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TAS2R43P59537 309 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RIPK1Q13546 671 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 MPV17LQ2QL34 196 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PIGYQ3MUY2 71 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 Q499Y3 187 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 TPTE2P1Q5T6R2 138 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 DDI2Q5TDH0 399 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 SATL1Q86VE3 508 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 THNSL2Q86YJ6 484 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CDH26Q8IXH8 852 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 OR13A1Q8NGR1 328 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CYGBQ8WWM9 190 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 GHSRQ92847 366 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 RBM14Q96PK6 669 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 PLCXD1Q9NUJ7 323 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 CLEC2DQ9UHP7 191 aa13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 AMMECR1Q9Y4X0 333 aaPredicted RBP13.67□□□□□ -0.22
MAP1LC3B-208ENST00000570189 MEIKINA0A087WXM9 373 aa13.66□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FAM90A18PA6NE21 464 aa13.66□□□□□ -0.22
MAP1LC3B-208ENST00000570189 FAM90A16PA6NEW6 464 aa13.66□□□□□ -0.22
MAP1LC3B-208ENST00000570189 EFCAB10A6NFE3 127 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms