RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 OR51T1Q8NGJ9 327 aa18.06■□□□□ 0.48
RBFOX1-219ENST00000569895 CNIH3Q8TBE1 160 aa18.06■□□□□ 0.48
RBFOX1-219ENST00000569895 WIPF2Q8TF74 440 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-219ENST00000569895 CITED2Q99967 270 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-219ENST00000569895 ZNF286AQ9HBT8 521 aa18.06■□□□□ 0.48
RBFOX1-219ENST00000569895 MEIKINA0A087WXM9 373 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 BAG2O95816 211 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 LIMS3P0CW19 117 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 LIMS4P0CW20 117 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 NFYBP25208 207 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 SOX2P48431 317 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 KCNJ3P48549 501 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 GTF2A1P52655 376 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 RBM39Q14498 530 aaKnown RBP18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 C17orf58Q2M2W7 97 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 BEAN1Q3B7T3 259 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 SAMD5Q5TGI4 173 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 ZNF529Q6P280 563 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 CENPVQ7Z7K6 275 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 OR5AU1Q8NGC0 362 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 OR9G1Q8NH87 305 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 APH1BQ8WW43 257 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 OCSTAMPQ9BR26 566 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 FAM192AQ9GZU8 254 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 PCDHB16Q9NRJ7 776 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 SMPD3Q9NY59 655 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 AMMECR1Q9Y4X0 333 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 NOTCH1P46531 2555 aa18.05■□□□□ 0.48
RBFOX1-219ENST00000569895 M0QZK8 103 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 HSPB6O14558 160 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 OR2F2O95006 317 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 CD24P25063 80 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 GDNFP39905 211 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 GLP1RP43220 463 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 PPP3R1P63098 170 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 ZSCAN26Q16670 478 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 TPTE2P1Q5T6R2 138 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 RBM14Q96PK6 669 aaKnown RBP18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 SLC25A33Q9BSK2 321 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 MMP28Q9H239 520 aa18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 PPIL3Q9H2H8 161 aaKnown RBP18.04■□□□□ 0.48
RBFOX1-219ENST00000569895 GABRPO00591 440 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 FAM106CPP0CH98 169 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 OR3A4PP47883 348 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 MED21Q13503 144 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 KPRPQ5T749 579 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 REC114Q7Z4M0 266 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 Q8NFD4 153 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 OR51A2Q8NGJ7 313 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 RPEQ96AT9 228 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 S100A13Q99584 98 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 METTL9Q9H1A3 318 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 TMEM138Q9NPI0 162 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 PAK1IP1Q9NWT1 392 aaPredicted RBP18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 TAS2R4Q9NYW5 299 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 KIF25Q9UIL4 384 aa18.03■□□□□ 0.48
RBFOX1-219ENST00000569895 TRAV24A0A0B4J272 114 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 LY6LH3BQJ8 138 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 HTR3BO95264 441 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 CSTBP04080 98 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 CGB3P0DN86 165 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 CGB7P0DN87 165 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 MYL12AP19105 171 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 PAX5Q02548 391 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 TMEM95Q3KNT9 176 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 ABCA11PQ4W5N1 156 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 ASCL4Q6XD76 172 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 TMEM106AQ96A25 262 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 KIRREL1Q96J84 757 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 CHCHD3Q9NX63 227 aaKnown RBP18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 BABAM2Q9NXR7 383 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 CALYQ9NYX4 217 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 IDI2-AS1Q9NZ38 188 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 ING4Q9UNL4 249 aa18.02■□□□□ 0.48
RBFOX1-219ENST00000569895 WBP4O75554 376 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 ETV1P50549 477 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 CD83Q01151 205 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 SMN1Q16637 294 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 SLC16A12Q6ZSM3 486 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 OR10A7Q8NGE5 316 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 RGP1Q92546 391 aaPredicted RBP18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 LINC00574Q9H8X3 128 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 ZNF281Q9Y2X9 895 aa18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 EXOSC1Q9Y3B2 195 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-219ENST00000569895 J3QR06 171 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 IL1AP01583 271 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 LPLP06858 475 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 ZNF93P35789 620 aaPredicted RBP18■□□□□ 0.47
RBFOX1-219ENST00000569895 PIGYQ3MUY2 71 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 TTC23Q5W5X9 447 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 THNSL2Q86YJ6 484 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 OR13A1Q8NGR1 328 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 OR10K1Q8NGX5 313 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 TOMM40LQ969M1 308 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 IL36GQ9NZH8 169 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 ST3GAL6Q9Y274 331 aa18■□□□□ 0.47
RBFOX1-219ENST00000569895 TCRBV4S1A1TA0A5B7 111 aa17.99■□□□□ 0.47
RBFOX1-219ENST00000569895 ADARB2-AS1A8MUL3 147 aa17.99■□□□□ 0.47
RBFOX1-219ENST00000569895 OGG1O15527 345 aa17.99■□□□□ 0.47
RBFOX1-219ENST00000569895 ZNF780AO75290 641 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms