RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 KDM4BO94953 1096 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 IGHG2P01859 326 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 T-ENOLP0DO92 83 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 C9orf66Q5T8R8 295 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 C12orf73Q69YU5 71 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 OR5M8Q8NGP6 311 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 MUC7Q8TAX7 377 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 PP6455Q8WZ26 134 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 OPALINQ96PE5 141 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 THTPAQ9BU02 230 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 GNG8Q9UK08 70 aa12.15□□□□□ -0.46
PALB2-205ENST00000567003 AMMECR1Q9Y4X0 333 aaPredicted RBP12.15□□□□□ -0.46
PALB2-205ENST00000567003 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 KBTBD11-OT1A0A1B0GTJ5 212 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 FGF16O43320 207 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 ZFPL1O95159 310 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 UBCP0CG48 685 aaKnown RBP12.14□□□□□ -0.47
PALB2-205ENST00000567003 ZNF20P17024 532 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 PRKACBP22694 351 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 BNIP1Q12981 228 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 KLHL22Q53GT1 634 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 COMMD1Q8N668 190 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 CCDC54Q8NEL0 328 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 OR10AC1Q8NH08 325 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 RFESDQ8TAC1 157 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 NEK6Q9HC98 313 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 PCDHB16Q9NRJ7 776 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 CALYQ9NYX4 217 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 IDI2-AS1Q9NZ38 188 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 KIF25Q9UIL4 384 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
PALB2-205ENST00000567003 SORL1Q92673 2214 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 ZAR1LA6NP61 321 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 DEGS1O15121 323 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 LY86O95711 162 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 CSN2P05814 226 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 CGB3P0DN86 165 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 CGB7P0DN87 165 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 GPR12P47775 334 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 REG1BP48304 166 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 GP2P55259 537 aaKnown RBP12.13□□□□□ -0.47
PALB2-205ENST00000567003 ZNF85Q03923 595 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 MADCAM1Q13477 382 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 CDK5R1Q15078 307 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 TEX38Q6PEX7 206 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 UTS2BQ765I0 119 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 OR13C9Q8NGT0 318 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 HRASLS5Q96KN8 279 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 OR6C3Q9NZP0 311 aa12.13□□□□□ -0.47
PALB2-205ENST00000567003 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 MEIKINA0A087WXM9 373 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 SULT1C4O75897 302 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 OR2T7P0C7T2 308 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 OCM2P0CE71 109 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 OCMP0CE72 109 aaPredicted RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 CALB2P22676 271 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 NANOS3P60323 173 aaKnown RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 ISL1P61371 349 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 GPR50Q13585 617 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 PNLIPRP3Q17RR3 467 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 MOB3BQ86TA1 216 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 OR2G2Q8NGZ5 317 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 MRGPRDQ8TDS7 321 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 SPSB1Q96BD6 273 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 NR1H4Q96RI1 486 aaPredicted RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 OSBPL10Q9BXB5 764 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 KRT84Q9NSB2 600 aa12.12□□□□□ -0.47
PALB2-205ENST00000567003 WARS2Q9UGM6 360 aaKnown RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 ZNF256Q9Y2P7 627 aaPredicted RBP12.12□□□□□ -0.47
PALB2-205ENST00000567003 H0YJX3 145 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 AP4M1O00189 453 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 IL1AP01583 271 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 CHATP28329 748 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 HTR1FP30939 366 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 SSTR5P35346 364 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 RAB7AP51149 207 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 FLOT2Q14254 428 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
PALB2-205ENST00000567003 FAM220AQ7Z4H9 259 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 CHST4Q8NCG5 386 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 OR51T1Q8NGJ9 327 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
PALB2-205ENST00000567003 PLPPR1Q8TBJ4 325 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms